DRSC/TRiP Functional Genomics Resources

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Protein Alignment lili and Lmbr1l

DIOPT Version :9

Sequence 1:NP_651290.1 Gene:lili / 42956 FlyBaseID:FBgn0027539 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_083374.1 Gene:Lmbr1l / 74775 MGIID:1289247 Length:489 Species:Mus musculus


Alignment Length:511 Identity:227/511 - (44%)
Similarity:310/511 - (60%) Gaps:54/511 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EEEEEEVTDLKLQLFHNTVREHIIFLLLIILLYSSSYVVVSRFRRRDRDDLYSNDEDEVLVYRIS 67
            |..:.||..::.||||:.|||.||.:||...||...::.::||::  ..:..:.|:::..|.:|:
Mouse     2 EAADYEVLSVREQLFHDRVRECIISILLFATLYILCHIFLTRFKK--PAEFTTVDDEDATVNKIA 64

  Fly    68 FWLCTFTLAVAEGAAMLLPVSIASNEVLLLYPNSYYVKWLNSSLIQGLWNHVFLFSNLSLFIFLP 132
            ..|||||||||.||.:|||.||.||||||..|.:||::|||.|||.||||.|||||||||...:|
Mouse    65 LELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLVFLMP 129

  Fly   133 FVYLFSESTGFVGNKKGILPRVYETFTVFMLMAIIVLVLTAVLSAVFGIEK-----LQFFWFLNL 192
            |.|.|:||.||.|::||:|.|||||..:.:|:.::||.:..|.||:...:|     |..||    
Mouse   130 FAYFFTESEGFAGSRKGVLGRVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYDFW---- 190

  Fly   193 GSVHLPFLYSCVSFLGVMLMLICTPYGFVRLFGVVNQVLVRPMLLRDVNEEFSAFYMEEASVKRK 257
             ..:||:||||:|||||:|:|:|||.|..|:|.|..::||:|.||.|:.|:.:....|||::.|:
Mouse   191 -EYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLNCSAFEEAALTRR 254

  Fly   258 LAHIELHNVSIADAANGGRLGNRIGLGRGRTFYPQPLLQHSQAHLYQRKAMASDVDELNDRLREL 322
            :.:                          .|....||                |::.|:.::..|
Mouse   255 ICN--------------------------PTSCWLPL----------------DMELLHRQVLAL 277

  Fly   323 DSERKELDKLRTSSTFQRTFVYPLAMLLLLFCTAVTILLVVQNTLELLIGIKALPLSTRQFALGI 387
            .::|..|:|.|.:|.:||...||||||.||..|.:::|:|..:.|||||...|:|...:..|||.
Mouse   278 QAQRVLLEKRRKASAWQRNLGYPLAMLCLLVLTGLSVLIVAVHILELLIDEAAMPRGMQDAALGQ 342

  Fly   388 SSLSKLGPFGAGLEVCLIFYLGATSVVGFYSMPFMRKVCPKRRQTSLPQLMLNCGFMLVLSSALP 452
            :|.||||.|||.::|.|||||..:|||||||.|....:.|:...||:.|::.||..:||||||||
Mouse   343 ASFSKLGSFGAIIQVVLIFYLMVSSVVGFYSSPLFGSLRPRWHDTSMTQIIGNCVCLLVLSSALP 407

  Fly   453 LLSRIIGITNFDLLGDFGAIEWLGNFQIVLLYNLVFGTTTALCLANKFTATVRREL 508
            :.||.:|:|.||||||||...|||||.||.|||..|...|.|||...|||.||.||
Mouse   408 VFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAEL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
liliNP_651290.1 LMBR1 63..495 CDD:282625 198/436 (45%)
Lmbr1lNP_083374.1 LCN1-binding. /evidence=ECO:0000250|UniProtKB:Q6UX01 1..76 29/75 (39%)
Interaction with LGB. /evidence=ECO:0000250|UniProtKB:Q6UX01 1..59 19/58 (33%)
LMBR1 21..452 CDD:368121 211/479 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832216
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3722
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10011
Inparanoid 1 1.050 402 1.000 Inparanoid score I1914
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48055
OrthoDB 1 1.010 - - D334825at33208
OrthoFinder 1 1.000 - - FOG0003610
OrthoInspector 1 1.000 - - otm43852
orthoMCL 1 0.900 - - OOG6_105069
Panther 1 1.100 - - LDO PTHR12625
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2924
SonicParanoid 1 1.000 - - X2485
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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