DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Hop3

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001031620.1 Gene:Hop3 / 826849 AraportID:AT4G12400 Length:558 Species:Arabidopsis thaliana


Alignment Length:239 Identity:64/239 - (26%)
Similarity:102/239 - (42%) Gaps:52/239 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DDED-----SKAG-----GDAKEKINFDNLDVDKVRLKVKENRT-------VINRKS-------- 89
            ||||     ::|.     |..:|.|.    |.||...:.:|.|:       .:.||.        
plant   260 DDEDISYLTNRAAVYLEMGKYEECIE----DCDKAVERGRELRSDFKMIARALTRKGSALVKMAR 320

  Fly    90 LEEDNEKQVKDMNQKSFMEQVEKDA----NDRAEARAKAEYE-------AELQRSQGNEAFRSQK 143
            ..:|.|..::.. ||:..|....|.    ||..:.:.:.|.:       ||.:|.:||..|:.||
plant   321 CSKDFEPAIETF-QKALTEHRNPDTLKKLNDAEKVKKELEQQEYFDPTIAEEEREKGNGFFKEQK 384

  Fly   144 YEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAWLYQAHAYK 208
            |.:|:.||.:||.:..:....|.|||.||.||......|||.:..:|      |.....:.::.|
plant   385 YPEAVKHYSEAIKRNPNDVRAYSNRAACYTKLGALPEGLKDAEKCIE------LDPSFTKGYSRK 443

  Fly   209 G-----LKQDDKFEESVVKAREHNPKQLAYIDKYIKQLEADLKA 247
            |     :|:.||..|:..:..:|:||...::|...:.:|...||
plant   444 GAIQFFMKEYDKAMETYQEGLKHDPKNQEFLDGVRRCVEQINKA 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 37/127 (29%)
TPR repeat 128..156 CDD:276809 13/27 (48%)
TPR repeat 161..192 CDD:276809 12/30 (40%)
TPR repeat 197..225 CDD:276809 7/32 (22%)
Hop3NP_001031620.1 TPR repeat 2..30 CDD:276809
TPR 8..>113 CDD:440225
TPR repeat 35..65 CDD:276809
TPR repeat 70..98 CDD:276809
STI1 131..185 CDD:436075
TPR repeat 234..258 CDD:276809
TPR 258..533 CDD:440225 64/239 (27%)
TPR repeat 263..293 CDD:276809 8/33 (24%)
TPR repeat 305..336 CDD:276809 6/31 (19%)
TPR repeat 369..397 CDD:276809 13/27 (48%)
TPR repeat 402..432 CDD:276809 12/35 (34%)
TPR repeat 437..465 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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