DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and RPAP3

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_078880.2 Gene:RPAP3 / 79657 HGNCID:26151 Length:665 Species:Homo sapiens


Alignment Length:295 Identity:58/295 - (19%)
Similarity:121/295 - (41%) Gaps:71/295 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ANEEVKDNAQLKATMLNCNLNPSVADDFAEFEATLAKIDCILQNKAPCDDEDSKAGGDAKEKI-- 64
            ||:.::...|:|..          |::..:|...|...:..::.|   |.|..:..|..:|.:  
Human     4 ANKAIELQLQVKQN----------AEELQDFMRDLENWEKDIKQK---DMELRRQNGVPEENLPP 55

  Fly    65 ----NFDNLDVDKVRLKVKENRTVINRKSLEEDNEKQVKDMNQKSF--------MEQVEKDANDR 117
                ||..    |.:.|.||:    ::|:.||:.:.::|..:.:::        :::::||.:..
Human    56 IRNGNFRK----KKKGKAKES----SKKTREENTKNRIKSYDYEAWAKLDVDRILDELDKDDSTH 112

  Fly   118 AEARAKAEYE----------AELQRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCY 172
            .....::|.|          |.:.:.:||:.|:..||::||..|.|.:.....:.:...|||..|
Human   113 ESLSQESESEEDGIHVDSQKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAY 177

  Fly   173 IKLQNYKRALKDC--------------------QYVLEKLQESNL---RAWLYQAHAYKGLKQDD 214
            .:|:.:..|..||                    ::.|:||:|:..   |....:.:.::...:..
Human   178 FRLKKFAVAESDCNLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELR 242

  Fly   215 KFEESVVKAREHNPKQLAYIDKYIKQLEADLKALE 249
            |..:::.......||:   .|..||..|.:.|.:|
Human   243 KISQALASKENSYPKE---ADIVIKSTEGERKQIE 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 28/148 (19%)
TPR repeat 128..156 CDD:276809 10/27 (37%)
TPR repeat 161..192 CDD:276809 9/50 (18%)
TPR repeat 197..225 CDD:276809 2/30 (7%)
RPAP3NP_078880.2 TPR 1 8..41 7/45 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..82 14/55 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..129 2/19 (11%)
TPR 126..372 CDD:440225 32/152 (21%)
TPR 2 133..166 10/32 (31%)
TPR repeat 133..161 CDD:276809 10/27 (37%)
TPR repeat 166..196 CDD:276809 8/29 (28%)
TPR 3 168..200 8/31 (26%)
TPR 4 201..234 5/32 (16%)
TPR repeat 201..229 CDD:276809 5/27 (19%)
TPR 5 282..315
TPR repeat 286..310 CDD:276809
TPR repeat 315..345 CDD:276809
TPR 6 317..349
TPR 7 350..383
TPR repeat 350..377 CDD:276809
RPAP3_C 546..636 CDD:464012
Blue background indicates that the domain is not in the aligned region.

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