DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and stub1

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001072347.1 Gene:stub1 / 779800 XenbaseID:XB-GENE-966697 Length:310 Species:Xenopus tropicalis


Alignment Length:103 Identity:36/103 - (34%)
Similarity:58/103 - (56%) Gaps:9/103 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 AELQRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKL 192
            |:..:.|||..|.::||::|:..|.|||.:....|:.|.||||||:|:|...:||.||::.||  
 Frog    32 AQELKEQGNRLFVARKYQEAVSCYSKAITRNSSIAVYYTNRALCYLKMQQLDKALADCKHALE-- 94

  Fly   193 QESNLRAWLYQAHAYKGLKQD--DKFEESVVK-AREHN 227
                |.....:||.:.|..|.  :.::|::.. .|.:|
 Frog    95 ----LDCQSVKAHFFLGQCQMELENYDEAIANLQRAYN 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 36/103 (35%)
TPR repeat 128..156 CDD:276809 11/27 (41%)
TPR repeat 161..192 CDD:276809 16/30 (53%)
TPR repeat 197..225 CDD:276809 6/30 (20%)
stub1NP_001072347.1 NlpI <32..151 CDD:443815 36/103 (35%)
TPR repeat 32..60 CDD:276809 11/27 (41%)
TPR repeat 65..95 CDD:276809 16/35 (46%)
TPR repeat 100..127 CDD:276809 6/26 (23%)
CHIP_TPR_N 148..232 CDD:436460
RING-Ubox_CHIP 234..304 CDD:438316
Blue background indicates that the domain is not in the aligned region.

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