DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Ttc4

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_006503471.1 Gene:Ttc4 / 72354 MGIID:1919604 Length:451 Species:Mus musculus


Alignment Length:194 Identity:49/194 - (25%)
Similarity:92/194 - (47%) Gaps:34/194 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DVDKVRLKVKENRTVINRKSLEEDNEKQVKDMNQKSFMEQVEKDANDRAEARAKAEYEAELQRSQ 134
            :.||:.|.:|        |:..|.:.::..|:   :.::.:..| :||     ..|.:|:..:.:
Mouse    38 EFDKIPLFMK--------KAPSEIDPEEFPDL---ACLQSMIFD-DDR-----YPEEQAKTYKDE 85

  Fly   135 GNEAFRSQKYEKAILHYDKAI-IKVKD---SAITYCNRALCYIKLQNYKRALKDCQYVLEKLQES 195
            ||:.|:.:.|:||:|.|.:.: .|..|   :|:.|.|||.....|.|.:.:|.|. ...:||:..
Mouse    86 GNDYFKEKDYKKAVLSYSEGLKKKCADPDLNAVLYTNRAAAQYYLGNVRSSLNDV-LAAKKLKPG 149

  Fly   196 NLRAWLYQAHAYKGLKQDDKFEESV--------VKAREHNPKQL-AYIDKYIKQLEADLKALEI 250
            :|:|.:..|..:..||.   |.|:|        :.|:|....:: |..||..:..|.||:..::
Mouse   150 HLKAIIRGALCHLELKH---FAEAVNWCDEGLQIDAKEKKLLEIRAKADKLKRMEERDLRKAKL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 20/66 (30%)
TPR repeat 128..156 CDD:276809 9/28 (32%)
TPR repeat 161..192 CDD:276809 9/30 (30%)
TPR_1 162..190 CDD:278916 9/27 (33%)
TPR repeat 197..225 CDD:276809 9/35 (26%)
Ttc4XP_006503471.1 3a0801s09 73..>218 CDD:273380 40/147 (27%)
TPR repeat 79..107 CDD:276809 9/27 (33%)
TPR repeat 116..146 CDD:276809 9/30 (30%)
TPR repeat 151..179 CDD:276809 8/30 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R218
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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