DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6980 and Ttc9c

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_081688.2 Gene:Ttc9c / 70387 MGIID:1917637 Length:171 Species:Mus musculus


Alignment Length:154 Identity:38/154 - (24%)
Similarity:76/154 - (49%) Gaps:36/154 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EAELQRSQGNEAFRSQKYEKAILHYDKAIIKVK--DSAI-------------------------- 163
            ||::.:.:||:.:|..||..|:..|.:|:::::  |.::                          
Mouse     7 EAQVYKEEGNQRYREGKYRDAVSRYHRALLQLRGLDPSLPSPLSSLGPQGPALTPEQENILHTIQ 71

  Fly   164 TYC--NRALCYIKLQ--NYKRALKDCQYVLEKLQESNLRAWLYQAH-AYKGLKQDDKFEESVVKA 223
            |:|  |.|.|.::::  ||:|..:..|.|||: |..|.:| ||:|. |:..|:..|:....::.|
Mouse    72 THCYNNLAACLLQMEPVNYERVREYSQKVLER-QPDNAKA-LYRAGVAFFHLQDYDRARHHLLAA 134

  Fly   224 REHNPKQLAYIDKYIKQLEADLKA 247
            ....||. |.:.:|::..:::|.:
Mouse   135 VNRQPKD-ANVRRYLQLTQSELSS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 21/94 (22%)
TPR repeat 128..156 CDD:276809 9/27 (33%)
TPR repeat 161..192 CDD:276809 12/60 (20%)
TPR_1 162..190 CDD:278916 10/57 (18%)
TPR repeat 197..225 CDD:276809 8/28 (29%)
Ttc9cNP_081688.2 3a0801s09 2..>127 CDD:273380 32/121 (26%)
TPR repeat 8..58 CDD:276809 10/49 (20%)
TPR 1 8..41 9/32 (28%)
TPR 2 72..107 13/35 (37%)
TPR repeat 74..102 CDD:276809 9/27 (33%)
PEP_TPR_lipo <82..>152 CDD:274350 21/72 (29%)
TPR repeat 107..137 CDD:276809 9/30 (30%)
TPR 3 108..141 9/33 (27%)
TPR repeat 142..165 CDD:276809 3/16 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

Return to query results.
Submit another query.