DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and ttc9c

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_956559.1 Gene:ttc9c / 393235 ZFINID:ZDB-GENE-040426-1053 Length:217 Species:Danio rerio


Alignment Length:182 Identity:37/182 - (20%)
Similarity:71/182 - (39%) Gaps:65/182 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EAELQRSQGNEAFRSQKYEKAILHYDKAIIKVK--DSAIT------------------------- 164
            ||...:::||..:|.:....||..|.:|::.::  ||.:.                         
Zfish    35 EAVRLKTEGNAFYRGRNVRSAIGRYHRALLVLRSLDSEVNSVMQGFGAPVPKLNQEQDELLRSTQ 99

  Fly   165 ---YCNRALCYI--KLQNYKRALKDCQYVLEKL--QESNLRAWLYQA------------------ 204
               |.|.|.|.:  :|.:|.|.|   :|.|:.|  :.::.:| ||:|                  
Zfish   100 IDCYNNLAACLLQRELVDYTRVL---EYSLKVLHWRPADTKA-LYRAGVASLELGDAPAARQYLT 160

  Fly   205 HAYKG-------LKQDDKFEESVVKAREHNPKQLAYIDKYIKQLEADLKALE 249
            .|.:|       .||..:.||.:  ::::..::..|...:.||.:|:.:..|
Zfish   161 QASRGKPNDADVKKQLQRVEERL--SQDYQKEKALYKGMFSKQKQAEEQIAE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 20/94 (21%)
TPR repeat 128..156 CDD:276809 8/27 (30%)
TPR repeat 161..192 CDD:276809 11/60 (18%)
TPR_1 162..190 CDD:278916 9/57 (16%)
TPR repeat 197..225 CDD:276809 10/52 (19%)
ttc9cNP_956559.1 3a0801s09 <36..>191 CDD:273380 31/160 (19%)
TPR repeat 99..131 CDD:276809 11/34 (32%)
TPR repeat 136..162 CDD:276809 4/26 (15%)
TPR repeat 170..195 CDD:276809 4/26 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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