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Protein Alignment CG6980 and Sgtb

DIOPT Version :10

Sequence 1:	NP_651289.1	Gene:	CG6980 / 42955	FlyBaseID:	FBgn0039228	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_853660.1	Gene:	Sgtb / 294708	RGDID:	727976	Length:	304	Species:	Rattus norvegicus

Alignment Length:	171	Identity:	48/171 - (28%)
Similarity:	75/171 - (43%)	Gaps:	27/171 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    92 EDNEKQVKDMNQKSFMEQVEKD-----ANDRAEARAKAEYEAELQRSQGNEAFRSQKYEKAILHY 151
            ||....|.....:.|...|.|:     :|...|...||:.    .:.:||...:.:.|..|:..|
  Rat    48 EDTHLAVSQPLTEMFTNSVCKNDIRPLSNSVPEDVGKADQ----LKDEGNNHMKEENYAAAVDCY 108

  Fly   152 DKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVL---EKLQESNLRAWLYQAHAYKGLKQD 213
            .:||....::|:.|||||....||.:|..|:|||:..:   .|..::..|..|       .|...
  Rat   109 TQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGL-------ALTAM 166

  Fly   214 DKFEESVV---KAREHNPKQLAYIDKYIKQLE-ADLKALEI 250
            :||||:|.   ||.:.:|:.    |.|...|: |:.|..|:
  Rat   167 NKFEEAVTSYQKALDLDPEN----DSYKSNLKIAEQKLREV 203

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.