DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Sugt1

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001013069.1 Gene:Sugt1 / 290408 RGDID:1307550 Length:336 Species:Rattus norvegicus


Alignment Length:81 Identity:25/81 - (30%)
Similarity:37/81 - (45%) Gaps:8/81 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 EKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAWLYQAHAYKG 209
            :.|:....||:.:..|.|..||.||.|:|.|..|...:.|.:..|| |..:|..|.|     .||
  Rat    28 QAALEELTKALEQNPDDAQYYCQRAYCHILLGKYCDGIADVKKSLE-LNPNNSTALL-----RKG 86

  Fly   210 LKQDDKFEESVVKARE 225
            :  .:.:|:....|.|
  Rat    87 I--CEYYEKDYASALE 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 14/44 (32%)
TPR repeat 128..156 CDD:276809 3/10 (30%)
TPR repeat 161..192 CDD:276809 12/30 (40%)
TPR_1 162..190 CDD:278916 10/27 (37%)
TPR repeat 197..225 CDD:276809 6/27 (22%)
Sugt1NP_001013069.1 TPR 1 11..44 3/15 (20%)
PLN03088 21..336 CDD:215568 25/81 (31%)
TPR repeat 44..74 CDD:276809 12/30 (40%)
TPR 2 45..78 13/33 (39%)
TPR 45..78 CDD:197478 13/33 (39%)
TPR 3 79..112 7/29 (24%)
TPR repeat 79..107 CDD:276809 7/29 (24%)
p23_CS_hSgt1_like 146..229 CDD:107239
SGS 256..336 CDD:282811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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