DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and TTC28

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001138890.1 Gene:TTC28 / 23331 HGNCID:29179 Length:2481 Species:Homo sapiens


Alignment Length:146 Identity:34/146 - (23%)
Similarity:57/146 - (39%) Gaps:54/146 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 AKAEYEAELQRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQ 186
            :|||:..:::  |.|:|.....:..||:.|::|:.....:.|.|.||:..|:|:|.|.:||.|  
Human    54 SKAEFVEKVR--QSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDD-- 114

  Fly   187 YVLEKLQESNLRAWLYQAHAYKGLKQDDKFEESVVKAREHNPK----------QLAYIDKYIKQL 241
                                             .:|||..|||          .|.|:.::...|
Human   115 ---------------------------------AIKARLLNPKWPKAYFRQGVALQYLGRHADAL 146

  Fly   242 EA-------DLKALEI 250
            .|       |.|:|::
Human   147 AAFASGLAQDPKSLQL 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 18/62 (29%)
TPR repeat 128..156 CDD:276809 7/27 (26%)
TPR repeat 161..192 CDD:276809 11/30 (37%)
TPR_1 162..190 CDD:278916 11/27 (41%)
TPR repeat 197..225 CDD:276809 2/27 (7%)
TTC28NP_001138890.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
TPR 1 58..91 7/34 (21%)
TPR_11 63..123 CDD:290150 21/96 (22%)
TPR repeat 91..121 CDD:276809 14/64 (22%)
TPR 2 93..125 16/66 (24%)
TPR_11 94..157 CDD:290150 20/97 (21%)
TPR 3 126..159 5/32 (16%)
TPR repeat 126..154 CDD:276809 4/27 (15%)
TPR repeat 160..188 CDD:276809 1/3 (33%)
TPR 4 196..229
TPR 5 234..267
TPR repeat 236..262 CDD:276809
TPR 6 274..307
TPR repeat 274..306 CDD:276809
TPR_11 275..345 CDD:290150
TPR 7 314..347
TPR_12 315..386 CDD:290160
TPR repeat 316..342 CDD:276809
TPR 8 354..387
TPR repeat 354..382 CDD:276809
TPR_7 357..391 CDD:289919
TPR repeat 393..423 CDD:276809
TPR 9 394..427
TPR 394..426 CDD:197478
TPR 414..717 CDD:223533
TPR repeat 428..459 CDD:276809
TPR 10 434..467
TPR 11 474..507
TPR repeat 475..502 CDD:276809
TPR 12 514..547
TPR repeat 515..542 CDD:276809
TPR_7 516..551 CDD:289919
TPR 13 554..587
TPR repeat 554..582 CDD:276809
TPR 14 594..627
TPR repeat 594..622 CDD:276809
TPR_7 596..631 CDD:289919
TPR repeat 633..663 CDD:276809
TPR 15 634..667
TPR_7 636..670 CDD:289919
TPR 16 674..707
TPR 694..995 CDD:223533
TPR repeat 712..739 CDD:276809
TPR 17 714..747
TPR 18 754..787
TPR repeat 754..782 CDD:276809
TPR 19 794..827
TPR repeat 794..822 CDD:276809
TPR repeat 833..863 CDD:276809
TPR 20 834..867
TPR 21 877..910
TPR repeat 878..905 CDD:276809
TPR_7 879..911 CDD:289919
TPR repeat 916..950 CDD:276809
TPR 22 917..950
TPR 23 957..990
TPR repeat 957..982 CDD:276809
TPR_7 959..994 CDD:289919
TPR 24 997..1030
TPR repeat 997..1025 CDD:276809
TPR_12 999..1067 CDD:290160
TPR 25 1037..1070
TPR repeat 1037..1065 CDD:276809
TPR_12 1038..1109 CDD:290160
TPR repeat 1075..1105 CDD:276809
TPR 26 1077..1110
TPR_12 1079..1148 CDD:290160
TPR 27 1117..1150
TPR repeat 1117..1143 CDD:276809
TPR 28 1169..1202
TPR repeat 1169..1194 CDD:276809
CHAT 1390..1713 CDD:289536
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2004..2055
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2075..2161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2176..2339
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2420..2467
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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