DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Stip1

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_058017.1 Gene:Stip1 / 20867 MGIID:109130 Length:543 Species:Mus musculus


Alignment Length:276 Identity:60/276 - (21%)
Similarity:106/276 - (38%) Gaps:84/276 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EDSKAGGDAKEKINFDNL--------DVDKVRLKVKENRTVIN-------------RKSLE---- 91
            ::.:.|.||.:|.:||..        ::|...:....|:..::             .|::|    
Mouse   227 KEKELGNDAYKKKDFDKALKHYDRAKELDPTNMTYITNQAAVHFEKGDYNKCRELCEKAIEVGRE 291

  Fly    92 --ED----------------NEKQVKD---MNQKSFMEQVEKDANDRAEARAKAEYEAEL----- 130
              ||                .|::.||   ...||..|....|...:.:...|...|.|.     
Mouse   292 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYIN 356

  Fly   131 ------QRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVL 189
                  ::::|||.|:...|.:|:.||.:||.:....|..|.|||.||.||..::.|||||:..:
Mouse   357 PDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECI 421

  Fly   190 EKLQESNLRAWLYQAHAYKGLKQDDKFEESVVKA-----------------------REHNP--- 228
            : |:.:.::.:..:|.|.:.:|...|..:...||                       |..:|   
Mouse   422 Q-LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDV 485

  Fly   229 KQLAYIDKYIKQLEAD 244
            |:.|..|..::|:.:|
Mouse   486 KRRAMADPEVQQIMSD 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 37/152 (24%)
TPR repeat 128..156 CDD:276809 10/38 (26%)
TPR repeat 161..192 CDD:276809 14/30 (47%)
TPR repeat 197..225 CDD:276809 6/50 (12%)
Stip1NP_058017.1 TPR 1 4..37
3a0801s09 <7..532 CDD:273380 60/276 (22%)
TPR repeat 7..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR 2 39..71
TPR repeat 72..100 CDD:276809
TPR 3 73..105
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..233 0/5 (0%)
Bipartite nuclear localization signal. /evidence=ECO:0000255 222..239 3/11 (27%)
TPR 4 225..258 7/30 (23%)
TPR repeat 229..253 CDD:276809 6/23 (26%)
TPR repeat 258..288 CDD:276809 2/29 (7%)
TPR 5 260..292 3/31 (10%)
TPR 6 300..333 6/32 (19%)
TPR repeat 300..328 CDD:276809 5/27 (19%)
TPR 7 360..393 10/32 (31%)
TPR repeat 364..388 CDD:276809 9/23 (39%)
TPR repeat 393..423 CDD:276809 14/30 (47%)
TPR 8 395..427 14/32 (44%)
TPR 9 428..461 6/32 (19%)
TPR repeat 428..456 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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