DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6980 and STUB1

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_319666.2 Gene:STUB1 / 1279886 VectorBaseID:AGAMI1_007576 Length:288 Species:Anopheles gambiae


Alignment Length:121 Identity:40/121 - (33%)
Similarity:67/121 - (55%) Gaps:13/121 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EAELQRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEK 191
            :.|| :.|||..|.::||:.|:..|.|||||...:|..:.|||||:||::.::.|..||:..|: 
Mosquito    13 DVEL-KDQGNRLFSARKYDDAVNLYTKAIIKNSTNATYFTNRALCHIKMKRWETACVDCRRALD- 75

  Fly   192 LQESNLRAWLYQAHAYKGLK--QDDKFEESVVK-AREHN---PKQLAYIDKYIKQL 241
             .:.|    |.:.|.:.||.  :.:.|:|::.. .|.|:   .::|.:.|....||
Mosquito    76 -MDPN----LVKGHFFLGLSLMELESFDEAIKHLQRAHDLAKEQKLNFGDDIASQL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 37/111 (33%)
TPR repeat 128..156 CDD:276809 12/27 (44%)
TPR repeat 161..192 CDD:276809 12/30 (40%)
TPR repeat 197..225 CDD:276809 6/30 (20%)
STUB1XP_319666.2 TPR repeat 16..41 CDD:276809 11/25 (44%)
TPR <20..149 CDD:440225 37/113 (33%)
TPR repeat 46..76 CDD:276809 12/31 (39%)
TPR repeat 81..107 CDD:276809 5/25 (20%)
CHIP_TPR_N 129..210 CDD:436460
RING-Ubox_CHIP 212..282 CDD:438316
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.