DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and STIP1

DIOPT Version :9

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001269581.1 Gene:STIP1 / 10963 HGNCID:11387 Length:590 Species:Homo sapiens


Alignment Length:276 Identity:62/276 - (22%)
Similarity:109/276 - (39%) Gaps:84/276 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EDSKAGGDAKEKINFDNL--DVDKVRLKVKENRTVINRKS---LEEDNEKQVKDMNQKS------ 105
            ::.:.|.||.:|.:||..  ..||.:.....|.|.|..::   .|:.:..:.:::.:|:      
Human   274 KEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE 338

  Fly   106 -------------------FMEQVEKDA-----NDRAEARA----KAEYEAEL------------ 130
                               |.|:..|||     ...||.|.    |...:||.            
Human   339 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQAEKILKEQERLAYIN 403

  Fly   131 ------QRSQGNEAFRSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVL 189
                  ::::|||.|:...|.:|:.||.:||.:....|..|.|||.||.||..::.|||||:..:
Human   404 PDLALEEKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECI 468

  Fly   190 EKLQESNLRAWLYQAHAYKGLKQDDKFEESVVKA-----------------------REHNP--- 228
            : |:.:.::.:..:|.|.:.:|...|..:...||                       |..:|   
Human   469 Q-LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDV 532

  Fly   229 KQLAYIDKYIKQLEAD 244
            |:.|..|..::|:.:|
Human   533 KRRAMADPEVQQIMSD 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 26/80 (33%)
TPR repeat 128..156 CDD:276809 11/45 (24%)
TPR repeat 161..192 CDD:276809 14/30 (47%)
TPR_1 162..190 CDD:278916 14/27 (52%)
TPR repeat 197..225 CDD:276809 6/50 (12%)
STIP1NP_001269581.1 PLN03088 <54..579 CDD:330826 62/276 (22%)
TPR repeat 54..79 CDD:276809
TPR repeat 84..114 CDD:276809
TPR repeat 119..147 CDD:276809
TPR repeat 276..300 CDD:276809 8/23 (35%)
TPR repeat 305..335 CDD:276809 5/29 (17%)
TPR repeat 347..375 CDD:276809 5/27 (19%)
TPR repeat 411..435 CDD:276809 9/23 (39%)
TPR repeat 440..470 CDD:276809 14/30 (47%)
TPR repeat 475..503 CDD:276809 6/27 (22%)
TPR repeat 509..538 CDD:276809 4/28 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0548
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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