DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polybromo and SPT7

DIOPT Version :9

Sequence 1:NP_651288.1 Gene:polybromo / 42954 FlyBaseID:FBgn0039227 Length:1654 Species:Drosophila melanogaster
Sequence 2:NP_009637.1 Gene:SPT7 / 852373 SGDID:S000000285 Length:1332 Species:Saccharomyces cerevisiae


Alignment Length:1487 Identity:268/1487 - (18%)
Similarity:520/1487 - (34%) Gaps:397/1487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IRNIKKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDDLMADLELLIG 123
            |:|.::.:...|    :::.::....:::|:.:....|:.::..|...|.:  |.|.|....|.|
Yeast     7 IKNYQRTNAKAL----LKLTEKLFNKNFFDLYLTSQQLVVLEYLLSISSEE--DKLKAWDYFLKG 65

  Fly   124 N-----AKAFYIPGSSEHQDAVSLWQHIHS---QRQRIMEAN------GLAEEEPRARRMSRQVR 174
            |     .|:|.:....||..|||......|   ..|.|.:.|      .::.|           .
Yeast    66 NIALNVEKSFPLTQEEEHHGAVSPAVDTRSDDVSSQTIKDNNNTNTNTSISNE-----------N 119

  Fly   175 RMTSSTEPGGDGATDDEYNQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPID 239
            .:.:..|..||.|..:|.|          ...:...|.:...:|:|        |..|:.:....
Yeast   120 HVENEIEDKGDNAIANEDN----------FVNNDESDNVEEDLFKL--------DLEDLKQQISG 166

  Fly   240 LRLIATKIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQRRIELEMGKGKL 304
            .|.|. .:.:.....|.:...|.:...:|.  |.:.....|      ..:..:.:.|.|:||.: 
Yeast   167 TRFIG-NLSLKIRYVLWQCAIDYIYCDRNE--FGDENDTEY------TLLDVEEKEEEEIGKNE- 221

  Fly   305 AKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNAPGTSEHPGVTGPPLGNSLWK 369
                |..:...|:...|:.|..|::|.               |:...| :...|..||  .:|..
Yeast   222 ----KPQNKEGISKFAEDEDYDDEDEN---------------YDEDST-DVKNVDDPP--KNLDS 264

  Fly   370 LPVRRFHPEYFELIKRPISMS-QIHTKLKKGDYANISDLTADLYLMLDNAKKAFPTSHRTHKDAL 433
            :.......:....:...||:| :..:|||..   |:.::       :.|..|.:.:.....:..:
Yeast   265 ISSSNIEIDDERRLVLNISISKETLSKLKTN---NVEEI-------MGNWNKIYHSFEYDKETMI 319

  Fly   434 KMLKLMNA-KLVEESLEEGSDLDDEDA-EEMDTEVFTVSTQPEKRKPGRPRINSNSNSNASHTPN 496
            |.|||..: |::|:..::.|..|.|.| :|.|.|  ..:.:|:..:.......|..:...:..|.
Yeast   320 KRLKLEESDKMIEKGKKKRSRSDLEAATDEQDRE--NTNDEPDTNQKLPTPEGSTFSDTGNKRPK 382

  Fly   497 NSNSPKSNRIAI-NAAIKKKILSIQ-------------KYLV------------DYSLGNRRPIE 535
            .||...:..:.| |.::|..:.|||             |:|:            |..:|.....|
Yeast   383 QSNLDLTVNLGIENLSLKHLLSSIQQKKSQLGISDYELKHLIMDVRKNRSKWTSDERIGQEELYE 447

  Fly   536 M-----------------FMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRL 583
            .                 |:.|..::..|:|:.||:..:|:||:...:::.:|.:.::.|.|..|
Yeast   448 ACEKVVLELRNYTEHSTPFLNKVSKREAPNYHQIIKKSMDLNTVLKKLKSFQYDSKQEFVDDIML 512

  Fly   584 MFSNCRQYNEEGSNIYE-DANILERALNEKLKEFPGLTEGKKSQQKYSKVGRKLKTAVITERLWQ 647
            ::.||..||.:.|:... .|..:::...:.::..|.:|               ::.....|:..:
Yeast   513 IWKNCLTYNSDPSHFLRGHAIAMQKKSLQLIRMIPNIT---------------IRNRADLEKEIE 562

  Fly   648 FYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQK-LKQGAYDTLDDLAAD 711
            ..|..|:|:                           :.|..::....:| |..||:         
Yeast   563 DMEKDKDYE---------------------------LDEEEEVAGSGRKGLNMGAH--------- 591

  Fly   712 FLLMLENACKYNEPDSQIYKDALVLQQLTLQLKQQLRTERDSLPDV-PLAVQELFLTLFTTIYNH 775
             :|..||. |.:|.||            :..:|.:..|..|.|..| |...:|...|..:|:..|
Yeast   592 -MLAKENG-KVSEKDS------------SKTVKDEAPTNDDKLTSVIPEGEKEKDKTASSTVTVH 642

  Fly   776 QD-------EEGRCYSDSLAELPEYDEIGEGPKVRGIS--LDLVKRRLDKGAYKRLDVYQEDIFA 831
            ::       |.|:        ..|.|.:.|..|....|  .|..|:..:.|..   |...|:..|
Yeast   643 ENVNKNEIKENGK--------NEEQDMVEESSKTEDSSKDADAAKKDTEDGLQ---DKTAENKEA 696

  Fly   832 CLERARKLSRTDSDIFQDSIELQTYFIRKRD-------------------ELC---KDTLSSSAL 874
            ......:....|.|..:|.::.|:|.:.|.|                   |:|   .:...:..|
Yeast   697 GENNEEEEDDDDEDEDEDMVDSQSYLLEKDDDRDDLEISVWKTVTAKVRAEICLKRTEYFKNGKL 761

  Fly   875 NFSLERLMAD-----------VELCRQQKMQQEEQDQEQD-----------KEKDEFNAAKGESM 917
            |...|..:.:           :|...|:.::...|..||:           |::|:.........
Yeast   762 NSDSEAFLKNPQRMKRFDQLFLEYKEQKALESYRQKIEQNSIMKNGFGTVLKQEDDDQLQFHNDH 826

  Fly   918 TINQQVFSPGDYVYVQMP----------------ENKIPSICCIERLWTSPTNEKLMQASIFVRP 966
            ::|      |:..:.:.|                .|.||.|  :.....:.|.:|:..||:....
Yeast   827 SLN------GNEAFEKQPNDIELDDTRFLQEYDISNAIPDI--VYEGVNTKTLDKMEDASVDRML 883

  Fly   967 HETYHVTTRKFLEKEV-FKSSLSQTISM-DKVQGMCYVMNIKDYIKMRPENLPEKDVYVCESRYN 1029
            ....:..:|....|:: ....::|.|:: .:::.:|:.:::   |:|....|..::     ||.|
Yeast   884 QNGINKQSRFLANKDLGLTPKMNQNITLIQQIRHICHKISL---IRMLQSPLSAQN-----SRSN 940

  Fly  1030 IQGRWFKKLKSWPPVREGSSVKFVPREQPLELKRVMSVFKERLEK--------------HKGELE 1080
            ........:.::..:.:...:..|.:....:.|....:..:.:.|              |...:.
Yeast   941 PNAFLNNHIYNYTIIDDSLDIDPVSQLPTHDYKNNRELIWKFMHKNISKVAMANGFETAHPSAIN 1005

  Fly  1081 EL---------KLQETLVEKEKPNVSCDPPPNAEVGSTYYQQYNTICSGAIKTGD--FVYVATQT 1134
            .|         .|.:||....:.| |.:...|.|:..|      |:....|...|  |.||.::.
Yeast  1006 MLTEIAGDYLSNLIKTLKLHHETN-SLNRGTNVEMLQT------TLLENGINRPDDLFSYVESEF 1063

  Fly  1135 GK-----QSVAQ-------------VQQIWEQN----GKSYFKGPWLLPPSETTP---------G 1168
            ||     |.:.|             :|::.|:|    .:|:|.|.:   .||.|.         |
Yeast  1064 GKKTKKLQDIKQKLESFLRALLRPTLQELSERNFEDESQSFFTGDF---ASELTGEDFFGFRELG 1125

  Fly  1169 LGKQFYRQELLLSTVEEVSPVVGIVGRCAVLEYSEFISSRPTEISESDVYICESVYDELKKALRK 1233
            |.|:|   .:|.|:|    |:..:..:...::....:.::..:..|||    ..||.::.|.:  
Yeast  1126 LEKEF---GVLSSSV----PLQLLTTQFQTVDGETKVQAKKIQPEESD----SIVYKKITKGM-- 1177

  Fly  1234 LVTGNMRKFQHS--PSVTEDEIFYFKTPIKPSKDFKNELNELGMLEDSMDGDTPSLSSDIAAMSS 1296
            |..|:   |.::  |.:.:|   |.::....:|..|:..|:...:..:.|.....|..|......
Yeast  1178 LDAGS---FWNTLLPLLQKD---YERSKAYIAKQSKSSANDKTSMTSTEDNSFALLEEDQFVSKK 1236

  Fly  1297 PAPSVNSTPLTSKVKAAKSAKKCLTGYILYSSEVRKSICQSNPDATFGDISRMVGTE 1353
            .|......| |.|:......|...:.:||...::...: :::|..|   ::..||.|
Yeast  1237 TATKARLPP-TGKISTTYKKKPIASAFILPEEDLENDV-KADPTTT---VNAKVGAE 1288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polybromoNP_651288.1 Bromodomain 46..158 CDD:295360 24/112 (21%)
Bromo_polybromo_II 191..294 CDD:99948 14/102 (14%)
Bromo_polybromo_III 335..443 CDD:99951 19/109 (17%)
Bromo_polybromo_IV 512..613 CDD:99949 28/143 (20%)
Bromo_polybromo_V 641..733 CDD:99946 16/92 (17%)
Bromo_polybromo_VI 758..867 CDD:99956 27/139 (19%)
BAH_polybromo 921..1040 CDD:240068 21/136 (15%)
BAH_polybromo 1120..1234 CDD:240068 32/146 (22%)
HMG-box 1320..1375 CDD:238037 7/34 (21%)
SPT7NP_009637.1 COG5076 282..680 CDD:227408 93/482 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.