Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001104751.1 | Gene: | brd4 / 570531 | ZFINID: | ZDB-GENE-030131-267 | Length: | 1444 | Species: | Danio rerio |
Alignment Length: | 1570 | Identity: | 265/1570 - (16%) |
---|---|---|---|
Similarity: | 492/1570 - (31%) | Gaps: | 505/1570 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 228 PDYYDVIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIF-- 290
Fly 291 -----TQRRIELE--MGKGKLAKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYN 348
Fly 349 APGTSEHPGVTGPPLGN---------SLWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANI 404
Fly 405 SDLTADLYLMLDNAKKAFPTSHRTHKDALKMLK----LMNAKLVEESLEEGSDLDDEDAEEMDTE 465
Fly 466 VFTVSTQPEKRKPGR--PRINSNSNSNASHTPN--------------NSNSPKSNRIAINAAIKK 514
Fly 515 KILSIQKYLVDYSLGNRRPIEMFMEKPPRKIYP-------------DYYDIIQNPIDMNTIEHNI 566
Fly 567 RTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNEKLKEFPGLTE---------- 621
Fly 622 --------------------------GKKSQQKYSKVGRKLKTAVITERLWQFYETVKEYQEPKG 660
Fly 661 KRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENACKYNEP 725
Fly 726 DSQIYKDALVLQQLTLQLKQQLRTERDSLPD--VPLAVQ---------ELFLTLFTTI------- 772
Fly 773 ------YNHQDEEGRCYSDSLAELPEYDEIG--------EGPKVRGISLDLVK---RRLDKGAYK 820
Fly 821 RLDVYQEDIFACLERARKLSRTDSDIFQDSIELQTYFIRKRDELCKDTLSSSALNFSLERLMADV 885
Fly 886 ELCRQQKMQQEEQDQEQDKEKDEFNAAKGESMTINQQVFSPGDYVYVQMPENKIPSICCIERLWT 950
Fly 951 SPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQGMCYVMNIKDYIK----- 1010
Fly 1011 -----------------------------------------MRPEN----LPEKDVYVCESRYN- 1029
Fly 1030 ------IQGRWFKKLKSWPPVREGSSVKFVPREQPLELK-------------------------- 1062
Fly 1063 -------RVMSVFKERLEKHKGELEELKLQETLVEKEKP--------NVSCD---PPPNAEVGST 1109
Fly 1110 YYQQYNTICSGAIKTGDFVYVATQTGKQSVAQVQQIWEQNGKSYFKGPWLLPPSETTPGLGKQFY 1174
Fly 1175 RQELLLSTVEEVSPVVGIVGRCAVLEYSEFISSRPTEISESDVYICESVYDELKKALRKLVTGNM 1239
Fly 1240 RKFQHSPSVTEDEIFYFKTPIKPSKDFKNELNELGMLEDSMDGDTPSLSSDIAAMSSPA--PSVN 1302
Fly 1303 STPLTSKVKAAKSAKKCLTGYILYSSEVRKSICQSNPDATFGDISRMVGTEWKNLPSSVKQSWED 1367
Fly 1368 RASRQNEETAALRRELDDV-------------QNSASPSSQVSQDVFGQVLTFECQWDKCDFQFE 1419
Fly 1420 ELSDCTEHCMSDSTGHIQRHPQAGVETEYVCLWRNCPRVKKSVQAFPNVLRLIKHVREVHLSKCG 1484
Fly 1485 KTISAADRSKNFVPRRQKHAQLATTVPI-PPSLAQSPRAPSNLEAVQLQQQQHPQQNMHQLQQQQ 1548
Fly 1549 TIVLGPPPEP 1558 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | |
Bromo_polybromo_II | 191..294 | CDD:99948 | 22/72 (31%) | ||
Bromo_polybromo_III | 335..443 | CDD:99951 | 23/120 (19%) | ||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 30/113 (27%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 15/91 (16%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | 23/141 (16%) | ||
BAH_polybromo | 921..1040 | CDD:240068 | 23/175 (13%) | ||
BAH_polybromo | 1120..1234 | CDD:240068 | 15/113 (13%) | ||
HMG-box | 1320..1375 | CDD:238037 | 8/54 (15%) | ||
brd4 | NP_001104751.1 | bromodomain 1; BD1 | 40..152 | 21/71 (30%) | |
Bromo_Brdt_I_like | 43..149 | CDD:99929 | 21/68 (31%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 154..217 | 16/79 (20%) | |||
bromodomain 2; BD2 | 356..473 | 34/135 (25%) | |||
Bromo_Brdt_II_like | 363..464 | CDD:99930 | 29/102 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 492..523 | 3/30 (10%) | |||
NPS region. /evidence=ECO:0000250 | 498..517 | 1/18 (6%) | |||
BID region. /evidence=ECO:0000250 | 538..610 | 16/95 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 540..645 | 23/128 (18%) | |||
ET domain | 654..729 | 16/82 (20%) | |||
BET | 657..721 | CDD:293640 | 14/71 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1020..1422 | 81/504 (16%) | |||
C-terminal (CTD) region. /evidence=ECO:0000250 | 1126..1444 | 60/364 (16%) | |||
BRD4_CDT | <1419..1444 | CDD:293710 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |