Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001188575.1 | Gene: | nej / 43856 | FlyBaseID: | FBgn0261617 | Length: | 3282 | Species: | Drosophila melanogaster |
Alignment Length: | 1763 | Identity: | 307/1763 - (17%) |
---|---|---|---|
Similarity: | 525/1763 - (29%) | Gaps: | 691/1763 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 305 AKRVKSLS---SAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNAPGTSEHPGVTGPPLGNS 366
Fly 367 LWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAF--------- 422
Fly 423 -----------PTSHRTHKDALKMLKLMNAKLVEESLEEGSDLDDE---DAEEMDTEVFTVSTQP 473
Fly 474 EKRKP---------GRPRINSNSNSNASH-----TPNNSNSP-KSNRIAINAAIKKK-------- 515
Fly 516 -----ILSIQK-YLVD-YSLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAA 573
Fly 574 VEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALN---EKLKEFPGLTEGKK---SQQKYSKV 632
Fly 633 GRKLKTAVITERLWQFYETVKEY-------------------------QEP-KGKRQLSLIFTKL 671
Fly 672 PSKSEYPDYYDIIREP-IDMDRIAQKLKQGAYDTLDDL-----AADFLLMLENA----CKYNE-- 724
Fly 725 -PDSQ--IYKDALVLQQL--------------------TLQLKQQLR----TERDSLPDVPLAVQ 762
Fly 763 ELFLTLFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGI---SLDLVKRRLDKGAYKRLDV 824
Fly 825 YQEDIFACLERARKLSRTDSDIF-------QDSI--------------ELQTYFIRKRDELCKDT 868
Fly 869 LSSSALNFSLERLMADVELCRQQKMQQ------------------------EEQDQEQDKEKDEF 909
Fly 910 NAAKGES----MTINQQVFSPGDYVYVQMPENKIPSICCIERLWTSPTNEKLMQASIFVRPHET- 969
Fly 970 ------YHVTTRKFLEKEVF----KSSLSQTISMDKVQG-----MCYVMNIKD------------ 1007
Fly 1008 YIKMRPENL-------------PEKDVYVC-------ESRYNIQ---------------GRWFKK 1037
Fly 1038 LKSWPPVREGSSVKFVPREQPLELKRVMSVFKERLEK------HKGELEE------------LKL 1084
Fly 1085 QETLVEKEKPNVSCD---------------------PPP---------NAEVGSTYYQQYN---- 1115
Fly 1116 -----------------------TICSGAIKTGDFVYVATQTGKQSVAQVQQIWE-QNGKSYFKG 1156
Fly 1157 PWLLPPSETTPGLGKQFYRQELLLSTVEEVSPVV------GIVGRCAVLEYSEFISSRPTEISES 1215
Fly 1216 DVYICESVYDELKKALRKLVT---GNMRKFQHSPSVTEDEIFYFKTPIKPSKDFKNELNELGMLE 1277
Fly 1278 ----------------------DSMDGDTPSLSSDIAAMSSPAPSVNSTPLTSKVKAAKSAKKCL 1320
Fly 1321 TGYILYSSEVRKSICQ---------------SNPDATFGDISRMVGTEWKNLPSSVKQSWEDRAS 1370
Fly 1371 RQNEETAALRRELDDVQNSASPSSQVSQ----------------DVFGQVLTFECQWDKCDFQFE 1419
Fly 1420 ELSDCTEH----------CMSDSTGHIQRHPQA----------GVETEYVCLWRNCPRVKKSVQA 1464
Fly 1465 FPNVLRLIKHVREVHLSKCGKTISAADRSKNFVPRRQKHAQLATTVPIPPSLAQSPRA---PSNL 1526
Fly 1527 EAVQLQQQQH--------------------PQQ-NMHQLQQQQTIVL---------GPPPEPLFV 1561
Fly 1562 TVPPRTTRVIHSEAYIKYIESLQTGSHLNVVT-----CNNNWRRALTHITPAQVVAKTALPEKWI 1621
Fly 1622 GPNLRDQG 1629 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | |
Bromo_polybromo_II | 191..294 | CDD:99948 | |||
Bromo_polybromo_III | 335..443 | CDD:99951 | 17/127 (13%) | ||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 31/118 (26%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 21/132 (16%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | 24/132 (18%) | ||
BAH_polybromo | 921..1040 | CDD:240068 | 29/181 (16%) | ||
BAH_polybromo | 1120..1234 | CDD:240068 | 26/120 (22%) | ||
HMG-box | 1320..1375 | CDD:238037 | 5/69 (7%) | ||
nej | NP_001188575.1 | ZnF_TAZ | 530..600 | CDD:214717 | |
KIX | 946..1024 | CDD:280354 | |||
Bromo_cbp_like | 1705..1812 | CDD:99927 | 28/111 (25%) | ||
RING_CBP-p300 | 1824..1906 | CDD:276805 | 12/87 (14%) | ||
PHD_CBP_p300 | 1908..1939 | CDD:277032 | 5/30 (17%) | ||
HAT_KAT11 | 1970..2283 | CDD:285432 | 55/347 (16%) | ||
ZZ_CBP | 2339..2379 | CDD:239077 | 7/39 (18%) | ||
ZnF_TAZ | 2404..2476 | CDD:214717 | 11/71 (15%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |