| Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_536734.2 | Gene: | Acf / 43751 | FlyBaseID: | FBgn0027620 | Length: | 1476 | Species: | Drosophila melanogaster |
| Alignment Length: | 798 | Identity: | 152/798 - (19%) |
|---|---|---|---|
| Similarity: | 289/798 - (36%) | Gaps: | 235/798 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 SRKRRASSISSRQDE--------DPLQLDDSTPE--------------QSPVQQTTTQSARKK-- 43
Fly 44 ------------RRLDPT-----ELCQQLYDSIRNIKKEDGSMLCDT-------------FIRVP 78
Fly 79 KRRQEPSYYDV---VVNPIDLLKVQQ--------KLKTDSY-DDLDDL-MADLE-----LLIGN- 124
Fly 125 ---AKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGLAEEEPRA--RRMSRQVRR-------MT 177
Fly 178 SSTEPGGDGATDDEYNQY----------EELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYD 232
Fly 233 VIEHPIDLRLIATKIQMNAYSSLAEM-------------------------------ERDLLQMT 266
Fly 267 KNA-----CLFNE-----PGSQIYKD-AKSLKRIFTQRRIELEMGKGKLAKRVKSLSSAAIAALK 320
Fly 321 EEVDSSDDEETSKKGEGPMW---ALFDHLYNAPGTSEHPGVTGPP----LGNSLWKLPVRRFHPE 378
Fly 379 YFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNA------KKAFPTSHRT--------- 428
Fly 429 HKDALKMLKLMNAKLV--------EESLEEGSDLD-DEDAEEMDTEVFTVSTQPEKRKP------ 478
Fly 479 -----GRPRINSNSNSNASHTPNNSNSPKSNR-----IAINAAIKKKIL-SIQKYLVDYSLGNRR 532
Fly 533 PIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSN 597
Fly 598 IYEDANILERALNEKLKE 615 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | 32/151 (21%) |
| Bromo_polybromo_II | 191..294 | CDD:99948 | 26/154 (17%) | ||
| Bromo_polybromo_III | 335..443 | CDD:99951 | 19/129 (15%) | ||
| Bromo_polybromo_IV | 512..613 | CDD:99949 | 29/101 (29%) | ||
| Bromo_polybromo_V | 641..733 | CDD:99946 | |||
| Bromo_polybromo_VI | 758..867 | CDD:99956 | |||
| BAH_polybromo | 921..1040 | CDD:240068 | |||
| BAH_polybromo | 1120..1234 | CDD:240068 | |||
| HMG-box | 1320..1375 | CDD:238037 | |||
| Acf | NP_536734.2 | WAC_Acf1_DNA_bd | 26..125 | CDD:287503 | |
| DDT | 346..411 | CDD:214726 | |||
| WHIM1 | 505..554 | CDD:292246 | |||
| WHIM2 | 637..666 | CDD:292247 | |||
| WHIM3 | 775..813 | CDD:292248 | 7/39 (18%) | ||
| PHD_RSF1 | 1064..1109 | CDD:277018 | 9/44 (20%) | ||
| PHD | 1244..1284 | CDD:214584 | 4/39 (10%) | ||
| Bromo_Acf1_like | 1349..1463 | CDD:99936 | 33/120 (28%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||