Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178845.1 | Gene: | Baz1b / 368002 | RGDID: | 1597089 | Length: | 1476 | Species: | Rattus norvegicus |
Alignment Length: | 1708 | Identity: | 326/1708 - (19%) |
---|---|---|---|
Similarity: | 552/1708 - (32%) | Gaps: | 612/1708 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 LIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGLAEE-EPRARRMSRQVRRMTSSTEPGG 184
Fly 185 DGATDDEYNQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIATKIQM 249
Fly 250 NAYSSLAEMERDLLQ-MTKNACLFNEPGSQIYKDAKSLKRIFTQRRIELEMGKGKLAKRVKSLSS 313
Fly 314 AAIAALKEEV-----------DSSDDEETS----------------------------------- 332
Fly 333 --KKGEGPMWA---LFDHLYNAPGTSEHPGVTGPPLGNSLWKLPVRRFHPEYFELIKRPISMSQI 392
Fly 393 HTKLKKGDYAN------------------ISDLTAD--LYLMLDNAKKAFPT-------SHRTHK 430
Fly 431 DALKMLKLMNAKL-----VEESLEEGSDL------DDEDAEEMDTEVFTVSTQ------------ 472
Fly 473 PEKRKPG-------RPRINSNSNSNASHTPNNSNSPKSNRIAINAAIKKKILSIQKYLVDYSLGN 530
Fly 531 RRPIEMFMEKPPR-------------KIYPDYYDIIQNPIDMNTI----EHNIRTDRYAAVEDVV 578
Fly 579 SDYRLMFSNCRQYNEEGSNIYEDANILERALNEKLKEFPGLTEGKKSQQKYSKVGR----KLKTA 639
Fly 640 VITERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDY---------YDIIREPIDMDRIAQ 695
Fly 696 KLKQGAYDTLDDLAADFLLMLENACKYNE---PDSQIYKDALVLQQLTLQLKQQLRTERDSLPDV 757
Fly 758 PLAVQELFLTLFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGISLDLVK-RRLDKGAYKR 821
Fly 822 LDVYQEDIFACLERARKLSRTDSDIFQDSIELQTYFIRKRD-----------------ELCKDTL 869
Fly 870 SSSALNFSLE-RLMADVELC-----------------RQQKMQQEEQDQEQDKEKDEFNAA--KG 914
Fly 915 ESMTINQQVFSPGDYVY------------------VQMPENKIPSICCIERLWTSPTNEKLMQAS 961
Fly 962 IFVRPHETYHVTTRKFLEKEVFKSSL---SQTISMDK-----------VQGMC----YVMNIKDY 1008
Fly 1009 ----IKMRPENLPEKDVYVCESRYNI---------QGRWFKKLKSWPPVREGSSVKFVPREQPLE 1060
Fly 1061 LKRVM----------SVFKERLEKHKGELEELKLQETLVEKEKPNV---SCDPPPNAEVGSTYYQ 1112
Fly 1113 QYNTICSGAIKTGDFVYVATQTGKQSVAQVQQIWEQNGKSYFKGPWLLPPSETTPGLGKQFYRQE 1177
Fly 1178 LLLSTVEEVSPVVGIVGRCAVLEYSEFI----------SSRPTEISESDVYICESVYDELKKALR 1232
Fly 1233 KLVTGNMRKFQHSPSVTEDEIFYFKTPIKPSKDFKNELNELGMLEDSMDGDTPSLSSDIAAMSSP 1297
Fly 1298 APSVNSTPLTSKVKAAKSAKK-----CLTG--YILYSSEVRKSICQ----------------SNP 1339
Fly 1340 DATFGDIS---------------------------RMVGTEWKNLPSS------VKQSWEDRASR 1371
Fly 1372 QNEETAALRRELDDVQNSASPSS-------QVSQDVFGQVLTFECQW--------DKCDFQFEEL 1421
Fly 1422 SDCTEHCMSDSTGHIQRHPQAGVETEYVCLWRNCPRVKKSVQAFPNVLRLIKHVREVHLSKCGKT 1486
Fly 1487 ISAADRSKN-FVPRRQKH 1503 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | 9/36 (25%) |
Bromo_polybromo_II | 191..294 | CDD:99948 | 14/103 (14%) | ||
Bromo_polybromo_III | 335..443 | CDD:99951 | 29/137 (21%) | ||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 24/117 (21%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 21/103 (20%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | 33/126 (26%) | ||
BAH_polybromo | 921..1040 | CDD:240068 | 29/167 (17%) | ||
BAH_polybromo | 1120..1234 | CDD:240068 | 17/123 (14%) | ||
HMG-box | 1320..1375 | CDD:238037 | 15/105 (14%) | ||
Baz1b | NP_001178845.1 | WAC_Acf1_DNA_bd | 21..120 | CDD:287503 | 30/170 (18%) |
DDT | 602..666 | CDD:214726 | 18/87 (21%) | ||
WHIM1 | 722..771 | CDD:292246 | 8/48 (17%) | ||
WHIM2 | 897..925 | CDD:292247 | 4/27 (15%) | ||
WHIM3 | 988..1026 | CDD:292248 | 12/43 (28%) | ||
PHD_BAZ1B | 1183..1228 | CDD:277098 | 6/44 (14%) | ||
Bromo_WSTF_like | 1337..1433 | CDD:99937 | 17/115 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |