| Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006233887.1 | Gene: | Brd3 / 362092 | RGDID: | 1308925 | Length: | 742 | Species: | Rattus norvegicus |
| Alignment Length: | 751 | Identity: | 145/751 - (19%) |
|---|---|---|---|
| Similarity: | 251/751 - (33%) | Gaps: | 263/751 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 547 PDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNE 611
Fly 612 KLKEFP------------GLTEGKK---------SQQ---------------------------- 627
Fly 628 ---------------------------------------KYSKVGRKLKT------AVITERLWQ 647
Fly 648 FYETVKEYQEP----------------------------------KGK-----RQLSLIFTKLPS 673
Fly 674 KS-----------------EYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENACK 721
Fly 722 YNEPDSQIYKDALVLQQLTLQLKQQLRTERDSLPDVPLAVQELFLTLFTTIYNHQDEEGRCYSDS 786
Fly 787 LAELPEYDEIGEGPKVRGISLDLVKRRLDKGAYKRLDVYQEDIFACLERARKLS----RTDSDIF 847
Fly 848 QDSIELQTYFIRKRDELCKDTLSSSALNFSLERL-MADVELCRQQKMQQEEQDQEQDKEKD-EFN 910
Fly 911 AAKGESMTINQQVFSPGDYVYVQMPENKIPSICCIERLWTSPTNEKL----MQASIFVRPHETYH 971
Fly 972 VTTRKFLEKEVFKSSLSQTISMDKVQGMCYVMNIK--------------DYIKMRPENLPEKDVY 1022
Fly 1023 V--CESRYNIQGRWFKKLKSWPPVREGSSVKFVPREQPLELKRVMSVFKERLEKHKGELEELKLQ 1085
Fly 1086 ETLVEKEKPNVSCDPPPNAEVGSTYYQQYNTICSGA 1121 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | |
| Bromo_polybromo_II | 191..294 | CDD:99948 | |||
| Bromo_polybromo_III | 335..443 | CDD:99951 | |||
| Bromo_polybromo_IV | 512..613 | CDD:99949 | 23/65 (35%) | ||
| Bromo_polybromo_V | 641..733 | CDD:99946 | 32/147 (22%) | ||
| Bromo_polybromo_VI | 758..867 | CDD:99956 | 18/112 (16%) | ||
| BAH_polybromo | 921..1040 | CDD:240068 | 22/138 (16%) | ||
| BAH_polybromo | 1120..1234 | CDD:240068 | 1/2 (50%) | ||
| HMG-box | 1320..1375 | CDD:238037 | |||
| Brd3 | XP_006233887.1 | Bromo_Brdt_I_like | 34..140 | CDD:99929 | 24/68 (35%) |
| Bromo_Brdt_II_like | 311..412 | CDD:99930 | 28/105 (27%) | ||
| BET | 588..652 | CDD:407211 | 9/64 (14%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||