| Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006532738.1 | Gene: | Bptf / 207165 | MGIID: | 2444008 | Length: | 3158 | Species: | Mus musculus |
| Alignment Length: | 721 | Identity: | 130/721 - (18%) |
|---|---|---|---|
| Similarity: | 259/721 - (35%) | Gaps: | 187/721 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 SSRQDEDPLQLDD--------STPEQ-SPVQQTTTQ-SARKKRRLDPTELCQ-----------QL 55
Fly 56 YDSIRNIKKEDGSMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDDLMADLEL 120
Fly 121 LIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRI--MEANGLAEEEPRARRMSRQVRRMTSSTEPG 183
Fly 184 GDGATDDEY-----NQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLI 243
Fly 244 ATKIQMNAYSSLAEMER-DLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQRR----------IEL 297
Fly 298 EMGKGKLAKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNAPGTSEHPGVTG-P 361
Fly 362 PLGNSLWKLPV---RRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAFP 423
Fly 424 TSHRTHKDALKMLKLMNAKLVEESLEEGSDL------------DDEDAEEMDT------------ 464
Fly 465 ---EVFTVSTQPEKRKP-------------GR-----------------PRINSNSNSNASHTPN 496
Fly 497 NSNSPKSNRIAINAAIKKKILSIQKYLVDYSLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNT 561
Fly 562 IEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNEKLKEFPGLTEGKKSQ 626
Fly 627 QKYSKV 632 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | 19/124 (15%) |
| Bromo_polybromo_II | 191..294 | CDD:99948 | 16/108 (15%) | ||
| Bromo_polybromo_III | 335..443 | CDD:99951 | 21/111 (19%) | ||
| Bromo_polybromo_IV | 512..613 | CDD:99949 | 28/100 (28%) | ||
| Bromo_polybromo_V | 641..733 | CDD:99946 | |||
| Bromo_polybromo_VI | 758..867 | CDD:99956 | |||
| BAH_polybromo | 921..1040 | CDD:240068 | |||
| BAH_polybromo | 1120..1234 | CDD:240068 | |||
| HMG-box | 1320..1375 | CDD:238037 | |||
| Bptf | XP_006532738.1 | DDT | 253..309 | CDD:367184 | |
| WHIM1 | 356..393 | CDD:373966 | |||
| PHD1_BPTF | 404..446 | CDD:277034 | |||
| WSD | 468..536 | CDD:373967 | |||
| MDN1 | <578..749 | CDD:227596 | |||
| DUF5585 | <2038..2345 | CDD:375359 | |||
| Med15 | <2246..>2609 | CDD:312941 | 20/90 (22%) | ||
| TPH | 2696..>2836 | CDD:372768 | 22/148 (15%) | ||
| PHD2_3_BPTF | 2923..2969 | CDD:277035 | 7/45 (16%) | ||
| PHD2_3_BPTF | 2981..3027 | CDD:277035 | 4/45 (9%) | ||
| Bromo_gcn5_like | 3043..3143 | CDD:99941 | 31/116 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||