DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polybromo and EP300

DIOPT Version :9

Sequence 1:NP_651288.1 Gene:polybromo / 42954 FlyBaseID:FBgn0039227 Length:1654 Species:Drosophila melanogaster
Sequence 2:NP_001420.2 Gene:EP300 / 2033 HGNCID:3373 Length:2414 Species:Homo sapiens


Alignment Length:1301 Identity:241/1301 - (18%)
Similarity:411/1301 - (31%) Gaps:501/1301 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   444 VEESLEEGSDLDDEDAEEMDTEVFTVSTQPEKRKPGRPRINSNSNSNASHTPNNSNSPKSNRIAI 508
            :.||..|...::..:.||..||:.| ..:.|:.:|      |.|.:.:|..|..|          
Human   997 ISESKVEDCKMESTETEERSTELKT-EIKEEEDQP------STSATQSSPAPGQS---------- 1044

  Fly   509 NAAIKKKILSIQK------------YLVD-YSLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMN 560
                ||||...::            |..| .||..|:|::     |.....|||:||:::|:|::
Human  1045 ----KKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVD-----PQLLGIPDYFDIVKSPMDLS 1100

  Fly   561 TIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNEKL---KEFPGLTEG 622
            ||:..:.|.:|......|.|..|||:|...||.:.|.:|:..:.|.....:::   .:..|...|
Human  1101 TIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEIDPVMQSLGYCCG 1165

  Fly   623 KK---SQQKYSKVGRKLKTAVITERLWQFYET-----VKEYQEPKGKRQLSL------------- 666
            :|   |.|.....|::|.| :..:..:..|:.     .|.:.|.:|: .:||             
Human  1166 RKLEFSPQTLCCYGKQLCT-IPRDATYYSYQNRYHFCEKCFNEIQGE-SVSLGDDPSQPQTTINK 1228

  Fly   667 -IFTKLPSKSEYPD------------------YYDIIREPID------MDRIAQKLKQGAYDT-- 704
             .|:|..:.:..|:                  :::|| .|..      :.:.|:..|:..:..  
Human  1229 EQFSKRKNDTLDPELFVECTECGRKMHQICVLHHEII-WPAGFVCDGCLKKSARTRKENKFSAKR 1292

  Fly   705 ---------LDDLAADFLLMLENACKYNEPDS-QIYKDALVLQQLTLQLKQQLRT----ERDSLP 755
                     |::...|||.      :.|.|:| ::....:.....|:::|..::.    ..:...
Human  1293 LPSTRLGTFLENRVNDFLR------RQNHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAE 1351

  Fly   756 DVPLAVQELFLTLFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGISLDLVKRRLDKGAY- 819
            ..|...:.||      .:...|....|:..  ..:.||......|..|.:.:..    ||...: 
Human  1352 SFPYRTKALF------AFEEIDGVDLCFFG--MHVQEYGSDCPPPNQRRVYISY----LDSVHFF 1404

  Fly   820 ----KRLDVYQEDIFACLERARKLSRTDSDIFQDSIELQTYFIRKRDELCKDTLSSSALNFSLER 880
                .|..||.|.:...||..:||..|...|:                .|.              
Human  1405 RPKCLRTAVYHEILIGYLEYVKKLGYTTGHIW----------------ACP-------------- 1439

  Fly   881 LMADVELCRQQKMQQEEQDQEQDKEKDEFNAAKGESMTINQQVFSPGDYVY-VQMPENKIPSICC 944
                                          .::|:            ||:: ...|:.|||    
Human  1440 ------------------------------PSEGD------------DYIFHCHPPDQKIP---- 1458

  Fly   945 IERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQTISMDKVQGMCYVMNIKDYI 1009
                     ..|.:|        |.|    :|.|:|.|     |:.|          |.:.||..
Human  1459 ---------KPKRLQ--------EWY----KKMLDKAV-----SERI----------VHDYKDIF 1487

  Fly  1010 KMRPEN--LPEKDVYVCESRYNIQGRWFKKLKSWPPVREGSSVKFVPREQPLELKRVMSVFKERL 1072
            |...|:  ...|::...|..:            ||.|.| .|:|.:.:|:. |.||..:...|..
Human  1488 KQATEDRLTSAKELPYFEGDF------------WPNVLE-ESIKELEQEEE-ERKREENTSNEST 1538

  Fly  1073 EKHKGELEELKLQE-----------TLVEKEKPNVSCDPPPNAEVGSTYYQQYNTICSGAIKTGD 1126
            :..||:.:..|.:.           :...|:||.:     ||  |.:...|:             
Human  1539 DVTKGDSKNAKKKNNKKTSKNKSSLSRGNKKKPGM-----PN--VSNDLSQK------------- 1583

  Fly  1127 FVYVATQTGKQSVAQVQQIWEQNGKSYFKGPWL--LPPSETTPGLGKQFYRQELLLSTVEEVSPV 1189
             :|...:..|:....::.|         .||..  |||                    :.:..|:
Human  1584 -LYATMEKHKEVFFVIRLI---------AGPAANSLPP--------------------IVDPDPL 1618

  Fly  1190 VG---IVGRCAVL-----EYSEFISSRPTEISESDVYICESVYDELKKALRKLVTGNMRKFQ--- 1243
            :.   :.||.|.|     ::.||.|.|..:.|.    :|..|....:...|.:.|.|..|..   
Human  1619 IPCDLMDGRDAFLTLARDKHLEFSSLRRAQWST----MCMLVELHTQSQDRFVYTCNECKHHVET 1679

  Fly  1244 --HSPSVTEDE---IFYFKTPIKPSKDFKNELNELGM-LEDSMDGDTPSLSSDIAAMSSPAPSVN 1302
              |. :|.||.   |..:.|     |:..:::.:||: |:|.      |.:...||..||..|  
Human  1680 RWHC-TVCEDYDLCITCYNT-----KNHDHKMEKLGLGLDDE------SNNQQAAATQSPGDS-- 1730

  Fly  1303 STPLTSKVKAAKSAKKCLTGYILYSSEVRKSICQSNPDATFGDISRMVGTEWKNLPSSVKQSWED 1367
                     ...|.::|:.. ::::.:.|.:.|                    :|||..|.    
Human  1731 ---------RRLSIQRCIQS-LVHACQCRNANC--------------------SLPSCQKM---- 1761

  Fly  1368 RASRQNEETAALRRELDDVQNSASPSSQVSQDVFGQVLTF------ECQWDKCDFQF-------- 1418
              .|..:.|...:|:    .|...|       :..|::..      .||.:||...|        
Human  1762 --KRVVQHTKGCKRK----TNGGCP-------ICKQLIALCCYHAKHCQENKCPVPFCLNIKQKL 1813

  Fly  1419 -------------------------------EELSDCTEHCMSDSTGHIQRHPQAGVETEYVCLW 1452
                                           :.|...|....:..||.....||.          
Human  1814 RQQQLQHRLQQAQMLRRRMASMQRTGVVGQQQGLPSPTPATPTTPTGQQPTTPQT---------- 1868

  Fly  1453 RNCPRVKKSVQAFPNVLRLIKHVREVHLSKCGKTISAADRSKNFVPRRQKHAQLA-------TTV 1510
               |:.....|..|                       .:....::||.|....::       .|.
Human  1869 ---PQPTSQPQPTP-----------------------PNSMPPYLPRTQAAGPVSQGKAAGQVTP 1907

  Fly  1511 PIPPSLAQSP---RAPSNLE-AVQLQQQQHPQQNMHQLQ-QQQTIVLGPPP----EPLFVTVPPR 1566
            |.||..||.|   ..|:.:| |:|:|:....|:.|..:| .|:.|....||    .|:.:..||.
Human  1908 PTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAPMGMNPPPM 1972

  Fly  1567 T 1567
            |
Human  1973 T 1973

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
polybromoNP_651288.1 Bromodomain 46..158 CDD:295360
Bromo_polybromo_II 191..294 CDD:99948
Bromo_polybromo_III 335..443 CDD:99951
Bromo_polybromo_IV 512..613 CDD:99949 33/113 (29%)
Bromo_polybromo_V 641..733 CDD:99946 21/146 (14%)
Bromo_polybromo_VI 758..867 CDD:99956 22/113 (19%)
BAH_polybromo 921..1040 CDD:240068 23/121 (19%)
BAH_polybromo 1120..1234 CDD:240068 21/123 (17%)
HMG-box 1320..1375 CDD:238037 7/54 (13%)
EP300NP_001420.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Interaction with RORA. /evidence=ECO:0000269|PubMed:9862959 2..149
Interaction with ALX1. /evidence=ECO:0000269|PubMed:12929931 2..139
Nuclear localization signal. /evidence=ECO:0000255 11..17
Med15 98..>280 CDD:312941
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..157
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..235
zf-TAZ 347..414 CDD:366931
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..518
KIX 566..646 CDD:366953
Med15 <648..>854 CDD:312941
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 729..1050 19/73 (26%)
TonB 961..>1064 CDD:223880 19/87 (22%)
CRD1, mediates transcriptional repression 1017..1029 4/12 (33%)
Bromo_cbp_like 1051..1158 CDD:99927 29/111 (26%)
RING_CBP-p300 1170..1242 CDD:276805 13/73 (18%)
PHD_p300 1243..1277 CDD:277116 3/34 (9%)
HAT_KAT11 1306..>1517 CDD:369758 58/353 (16%)
Interaction with histone. /evidence=ECO:0000269|PubMed:18273021 1397..1399 0/5 (0%)
Acetyl-CoA binding. /evidence=ECO:0000269|PubMed:24819397 1398..1400 1/1 (100%)