DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment polybromo and Kat2b

DIOPT Version :9

Sequence 1:NP_651288.1 Gene:polybromo / 42954 FlyBaseID:FBgn0039227 Length:1654 Species:Drosophila melanogaster
Sequence 2:NP_064389.2 Gene:Kat2b / 18519 MGIID:1343094 Length:813 Species:Mus musculus


Alignment Length:782 Identity:150/782 - (19%)
Similarity:244/782 - (31%) Gaps:259/782 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 PGSSEHQDAVSLWQHI----HSQRQRIMEANGLAEEE-PRARRMSRQVRRMTSSTEPGGDGATDD 190
            |.....|..|||.:..    |:....:.....::||| .|...:...|..:.:......|..|..
Mouse   103 PRGDLQQIIVSLTESCRSCSHALAAHVSHLENVSEEEMDRLLGIVLDVEYLFTCVHKEEDADTKQ 167

  Fly   191 EY-NQYEELFASVMTATDPVGDRLMHR-------------------MFQLLPSK---------KI 226
            .| ..::.|..|::....||.:..:.:                   .|..||||         |:
Mouse   168 VYFYLFKLLRKSILQRGKPVVEGSLEKKPPFEKPSIEQGVNNFVQYKFSHLPSKERQTTIELAKM 232

  Fly   227 YPD--YYDVIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMTKNACLFNEP----GSQIYKDAK- 284
            :.:  .|..:|.|...||.:....::.|..         ..|:..|..|.|    ....|:..| 
Mouse   233 FLNRINYWHLEAPSQRRLRSPNDDISGYKE---------NYTRWLCYCNVPQFCDSLPRYETTKV 288

  Fly   285 ----SLKRIFTQRRIEL------EMGKGKLAKRVKSLS--SAAIAALKEEVDSSDDEETSKKGEG 337
                .|:.:||..|.:|      |..|..|.||...|:  ...::.|:|||.|.:         .
Mouse   289 FGRTLLRSVFTIMRRQLLEQARQEKDKLPLEKRTLILTHFPKFLSMLEEEVYSQN---------S 344

  Fly   338 PMWALFDHLYNAPGTSE-------HPGVTGPPL---------------------------GNSLW 368
            |:|.. |.|..:..||.       .|.|||..|                           .|...
Mouse   345 PIWDQ-DFLSASSRTSPLGIQTVISPPVTGTALFSSNSTSHEQINGGRTSPGCRGSSGLEANPGE 408

  Fly   369 KLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAFPTSHRTHKDAL 433
            |..:...|..  |..||...|..|..:|.....:.|:|....|     ..:..|.::|....:|.
Mouse   409 KRKMNNSHAP--EEAKRSRVMGDIPVELINEVMSTITDPAGML-----GPETNFLSAHSARDEAA 466

  Fly   434 KMLK---LMNAKLVEESLEEG------------SDLDDEDAEEMDTEVFT-VSTQPEKR-----K 477
            ::.:   ::...:|..||.:.            .::.......|..|..| :...|:.:     |
Mouse   467 RLEERRGVIEFHVVGNSLNQKPNKKILMWLVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIK 531

  Fly   478 PGRP--------------------RINSNS--NSNASHTPNNSNSPKSNRIAINAAIKKKILSIQ 520
            .||.                    .:.||.  ....:|..|:..         ...||.:||:..
Mouse   532 DGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLK---------EYHIKHEILNFL 587

  Fly   521 KYLVDYSLGNRRPIEMFME-KPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYR-- 582
            .|..:|::|..:......| |.|:..|..|                            :.||.  
Mouse   588 TYADEYAIGYFKKQGFSKEIKIPKTKYVGY----------------------------IKDYEGA 624

  Fly   583 -LMFSNCR-----QYNEEGSNIYEDANILERALNEK----LKEFPGLT----------------- 620
             ||  .|.     .|.|....|.:...|:::.:..|    .|.:|||:                 
Mouse   625 TLM--GCELNPQIPYTEFSVIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKDGVRQIPIESIPGI 687

  Fly   621 --------------EGKKSQQKYSKVGRKLKTAVITERLWQFYETVKEYQEPKGKRQLSLIFTKL 671
                          |.|..:|.||.:...|:........|.|.|.||                  
Mouse   688 RETGWKPSGKEKSKEPKDPEQLYSTLKNILQQVKNHPNAWPFMEPVK------------------ 734

  Fly   672 PSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVL 736
              ::|.|.||::||.|:|:..::::|:...|.:.....||...:..|..:||.|:|:.||.|.:|
Mouse   735 --RTEAPGYYEVIRFPMDLKTMSERLRNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCASIL 797

  Fly   737 QQ 738
            ::
Mouse   798 EK 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
polybromoNP_651288.1 Bromodomain 46..158 CDD:295360 6/30 (20%)
Bromo_polybromo_II 191..294 CDD:99948 26/142 (18%)
Bromo_polybromo_III 335..443 CDD:99951 26/144 (18%)
Bromo_polybromo_IV 512..613 CDD:99949 22/113 (19%)
Bromo_polybromo_V 641..733 CDD:99946 24/91 (26%)
Bromo_polybromo_VI 758..867 CDD:99956
BAH_polybromo 921..1040 CDD:240068
BAH_polybromo 1120..1234 CDD:240068
HMG-box 1320..1375 CDD:238037
Kat2bNP_064389.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
PCAF_N 56..307 CDD:283997 41/212 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..423 4/44 (9%)
COG5076 468..807 CDD:227408 72/391 (18%)
Acetyltransf_1 531..603 CDD:278980 14/80 (18%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:Q92830 555..557 0/1 (0%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:Q92830 562..568 0/5 (0%)
Acetyl-CoA binding. /evidence=ECO:0000250|UniProtKB:Q92830 593..596 1/2 (50%)
Bromo_gcn5_like 708..807 CDD:99941 30/112 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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