Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_508124.1 | Gene: | F13C5.2 / 180410 | WormBaseID: | WBGene00017423 | Length: | 374 | Species: | Caenorhabditis elegans |
Alignment Length: | 260 | Identity: | 63/260 - (24%) |
---|---|---|---|
Similarity: | 99/260 - (38%) | Gaps: | 64/260 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 479 GRPRINSNSNSNASHTPNNSNSPKSNRIAINAAIK--------KKILSIQKYLV-----DYSLGN 530
Fly 531 RRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEG 595
Fly 596 SNIYEDANILERALNEK-LKEFP----------GLTEGKKSQQKYSKVGRKLKTAVITERLWQFY 649
Fly 650 ETVKE-------YQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQGAYDTLDD 707
Fly 708 707 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | |
Bromo_polybromo_II | 191..294 | CDD:99948 | |||
Bromo_polybromo_III | 335..443 | CDD:99951 | |||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 28/114 (25%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 16/74 (22%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | |||
BAH_polybromo | 921..1040 | CDD:240068 | |||
BAH_polybromo | 1120..1234 | CDD:240068 | |||
HMG-box | 1320..1375 | CDD:238037 | |||
F13C5.2 | NP_508124.1 | Bromodomain | 118..219 | CDD:383021 | 27/105 (26%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |