Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_493339.1 | Gene: | sepa-1 / 173196 | WormBaseID: | WBGene00010808 | Length: | 702 | Species: | Caenorhabditis elegans |
Alignment Length: | 811 | Identity: | 145/811 - (17%) |
---|---|---|---|
Similarity: | 264/811 - (32%) | Gaps: | 265/811 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 532 RPIEMFMEKPPRKIYPDYYDIIQNPI---------DMNTIEHNIRTDRYAAVEDVVSDYRLMFSN 587
Fly 588 CRQYNEEGSNIYEDANILERALNEKLKEFPGLTEGKKSQQKYSKVGRKLKTAVITERLWQFYETV 652
Fly 653 KEYQEPKGKRQLSLIFTKLPSKSE-----YPDYYD-----IIREPIDMDR---IAQKLKQGAYDT 704
Fly 705 LD--DLAADFLLMLENACKYNEPDSQIYKDALVLQQLTLQLKQQLRTERDSLPDVPLAVQELFLT 767
Fly 768 LFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGISLDLVKRRLDKGAYKRLDVYQEDIFAC 832
Fly 833 LERARKLSRTDSDIFQDSIE-LQTYFI-RKRD-ELCKDTLSSSA------------------LNF 876
Fly 877 SLERLMADVELCRQQKMQQEEQDQEQD---KEKDEFNAAKGESMTINQQVFSPGDYVYVQMPENK 938
Fly 939 IPSICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEK-EVFKSSLSQTISMDKVQGMCYV 1002
Fly 1003 MNIKDYIKMRPENLPEKDVYVCESRYNIQGRWFKKLKSWPPVREGSSVKFVPREQPLELKRVMSV 1067
Fly 1068 FKERLEKHKGELEELKLQ-----------------ETLVEKEKP----------NVSCDPPPNAE 1105
Fly 1106 VGSTYYQQYNTICSGAIKTGDFVYVATQTGKQSVAQVQQIWEQNGKSYFKGPWLLPPSETTPGLG 1170
Fly 1171 KQFYRQELLLSTVEEVS-----PVVGIVGRC--AVLEYSEFISSRPTEISESDVY--ICESVYDE 1226
Fly 1227 -LKKALRKLVTGNMRKFQHS---PSVTEDEI 1253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | |
Bromo_polybromo_II | 191..294 | CDD:99948 | |||
Bromo_polybromo_III | 335..443 | CDD:99951 | |||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 17/89 (19%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 16/106 (15%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | 24/111 (22%) | ||
BAH_polybromo | 921..1040 | CDD:240068 | 20/119 (17%) | ||
BAH_polybromo | 1120..1234 | CDD:240068 | 25/123 (20%) | ||
HMG-box | 1320..1375 | CDD:238037 | |||
sepa-1 | NP_493339.1 | KIX | 600..676 | CDD:280354 | 21/106 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5076 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |