Sequence 1: | NP_651288.1 | Gene: | polybromo / 42954 | FlyBaseID: | FBgn0039227 | Length: | 1654 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021008.1 | Gene: | pbrm-1 / 172504 | WormBaseID: | WBGene00007042 | Length: | 1883 | Species: | Caenorhabditis elegans |
Alignment Length: | 1958 | Identity: | 565/1958 - (28%) |
---|---|---|---|
Similarity: | 894/1958 - (45%) | Gaps: | 387/1958 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLSRKRRASSISSRQDEDPLQLDDSTPEQSPVQQTTTQSARKKRRLDPTELCQQLYD-------- 57
Fly 58 -SIRNIKKEDG-SMLCDTFIRVPKRRQEPSYYDVVVNPIDLLKVQQKLKTDSYDDLDDLMADLEL 120
Fly 121 LIGNAKAFYIPGSSEHQDAVSLWQHIHSQRQRIMEANGL--AEEEPRARRMSRQVRRMTSSTEPG 183
Fly 184 GDGAT-------DDEYNQYEELFASVMTATDPVGDRLMHRMFQLLPSKKIYPDYYDVIEHPIDLR 241
Fly 242 LIATKIQMNAYSSLAEMERDLLQMTKNACLFNEPGSQIYKDAKSLKRIFTQRRIELE------MG 300
Fly 301 KGKLAKRVKSLSSAAIAALKEEVDSSDDEETSKKGEGPMWALFDHLYNAPGTSEHPGVTGPPLGN 365
Fly 366 SLWKLPVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAFPTSHRTHK 430
Fly 431 DA--LKMLKLMNAKLVEESLEEGSDLDDEDAEEMDTEVFTVSTQPEKRKPGRPRIN---SNSNSN 490
Fly 491 ASHTP---NNSNSPKSNR------------------IAINAA-IKKKILS------IQKYLVDYS 527
Fly 528 LGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYN 592
Fly 593 EEGSNIYEDANILERAL--------NEKL---------------------------------KEF 616
Fly 617 PGLTEGKKSQQKYSKVGRKLKTAVI-----TERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSE 676
Fly 677 YPDYYDIIREPIDMDRIAQKLKQGAYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVLQQLTL 741
Fly 742 QLKQQLRTERDSLPDVPLAVQELFLTLFTTIYNHQDEEGRCYSDSLAELPEYDEIGEGPKVRGI- 805
Fly 806 ------SLDLVKRRLDKGAYKRLDVYQEDIFACLERARKLSRTDSDIFQDSIELQTYFIRKRDEL 864
Fly 865 CKDTLSSSALNFSLERLMADVELCRQQKMQQEEQDQEQDKE---KDEFNAAKGESMTINQQVFSP 926
Fly 927 GDYVYV-QMPENKIP-SICCIERLWTSPTNEKLMQASIFVRPHETYHVTTRKFLEKEVFKSSLSQ 989
Fly 990 TISMDKVQGMCYVMNIKDYIKMRPENLPEKDVYVCESRYNIQGRWFKKLKSWPPVREGSSVKFVP 1054
Fly 1055 REQPLELKRVMSVF-------KERL----EKHKGELEELKLQETL-VEKEKPNVSCDPPPNAEVG 1107
Fly 1108 STYYQQYNTICSGAIKTGDFVYVA-------TQTGKQSVAQVQQIW-EQNGKSYFKGPWLLPPSE 1164
Fly 1165 TTPGLGKQFYRQELL-LSTVEEVSPVVGIVGRCAVLEYSEFISSRPTEISESDVYICE------- 1221
Fly 1222 ------------SVYDELK----------KALRKLVTGNMRKFQHSPSVTEDEIFYFKTPIKPSK 1264
Fly 1265 DFKNELNELGM-----LEDSMDGDT---PSLSSDI-----------AAMSSPAPSVNSTPLTSKV 1310
Fly 1311 KA-----AKSAKKCLTGYILYSSEVRKSICQSNPDATFGDISRMVGTEWKNLPSSVKQSWEDRAS 1370
Fly 1371 RQNEETAALRRELDDVQNSASPSSQVSQDVFGQVLTFECQWDKCDFQFEELSDCTEHCMSDSTGH 1435
Fly 1436 IQRHPQAGVETEYVCLWRNCPRVKKSVQAFPNVLRLIKHVREVHLSKCGKTISAADRSKNF---V 1497
Fly 1498 PRRQKHAQLATTVPIPPSLAQSPRAPSN---LEAVQLQQQQH-------------PQ-------- 1538
Fly 1539 QNMH--------------------------------------------------------QLQQQ 1547
Fly 1548 QTIVLGPPP-------EPLFVT---------------VPP---RTTRVIHSEAYIKYIESLQTGS 1587
Fly 1588 HLNVVTCNNNWRRAL-THITPAQVVAKTALPEKWI-----GPNLRDQGNVVQALCHLRNFMVDDI 1646
Fly 1647 LQIRRSCN 1654 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
polybromo | NP_651288.1 | Bromodomain | 46..158 | CDD:295360 | 31/121 (26%) |
Bromo_polybromo_II | 191..294 | CDD:99948 | 38/102 (37%) | ||
Bromo_polybromo_III | 335..443 | CDD:99951 | 35/109 (32%) | ||
Bromo_polybromo_IV | 512..613 | CDD:99949 | 44/114 (39%) | ||
Bromo_polybromo_V | 641..733 | CDD:99946 | 43/96 (45%) | ||
Bromo_polybromo_VI | 758..867 | CDD:99956 | 41/115 (36%) | ||
BAH_polybromo | 921..1040 | CDD:240068 | 39/120 (33%) | ||
BAH_polybromo | 1120..1234 | CDD:240068 | 38/151 (25%) | ||
HMG-box | 1320..1375 | CDD:238037 | 27/54 (50%) | ||
pbrm-1 | NP_001021008.1 | Bromo_polybromo_I | 40..153 | CDD:99954 | 30/112 (27%) |
Bromodomain | 198..293 | CDD:383021 | 38/95 (40%) | ||
Bromo_polybromo_III | 343..443 | CDD:99951 | 34/104 (33%) | ||
Bromo_polybromo_V | 535..638 | CDD:99946 | 41/103 (40%) | ||
Bromo_polybromo_V | 710..815 | CDD:99946 | 48/104 (46%) | ||
Bromo_polybromo_VI | 822..936 | CDD:99956 | 43/119 (36%) | ||
BAH_polybromo | 993..1114 | CDD:240068 | 39/120 (33%) | ||
BAH_polybromo | 1201..1313 | CDD:240068 | 31/111 (28%) | ||
HMG-box | 1451..1503 | CDD:238037 | 28/56 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160159200 | |
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I4332 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H10044 | |
Inparanoid | 1 | 1.050 | 662 | 1.000 | Inparanoid score | I395 |
Isobase | 1 | 0.950 | - | 0.959148 | Normalized mean entropy | S4369 |
OMA | 1 | 1.010 | - | - | QHG52483 | |
OrthoDB | 1 | 1.010 | - | - | D168080at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002672 | |
OrthoInspector | 1 | 1.000 | - | - | oto20237 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103614 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR16062 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R11130 |
SonicParanoid | 1 | 1.000 | - | - | X2912 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.890 |