DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets96B and gabpa

DIOPT Version :10

Sequence 1:NP_996290.1 Gene:Ets96B / 42952 FlyBaseID:FBgn0039225 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_571662.1 Gene:gabpa / 58110 ZFINID:ZDB-GENE-011010-2 Length:455 Species:Danio rerio


Alignment Length:196 Identity:70/196 - (35%)
Similarity:103/196 - (52%) Gaps:26/196 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   410 AHQQQTQSQSVYRDLSPTTLAAVSDADLKYDSGPYNAAISSTYPSALRPNVVDSTTSSDAELRLD 474
            |.|.|:|..:|..| .|..:..              |.:....|:|::  |:....:..|.....
Zfish   247 ASQDQSQEATVTID-QPVQIIP--------------APVQQATPTAIK--VMKHNKTPRAPRISG 294

  Fly   475 QFYASNGISTSSNGQAISQRRGSLQLWQFLVALLDEPTTSASCIAWTGRGMEFKLIEPEEVARRW 539
            :..:|.|..|.:|||        :||||||:.||.: ..|..||:|.|...||||.:||.||::|
Zfish   295 EERSSPGNRTGNNGQ--------IQLWQFLLELLTD-KDSRDCISWVGEEGEFKLNQPELVAQKW 350

  Fly   540 GLQKNRPAMNYDKLSRSLRYYYEKGIMQKVNGERYVYRFVCDPDALFNMAYGHLTTGSGKGDQHQ 604
            |.:||:|.|||:||||:|||||:..::.||.|:|:||:||||...|...:...|.....:.:|.:
Zfish   351 GQRKNKPTMNYEKLSRALRYYYDGDMISKVQGKRFVYKFVCDLRTLIGYSAAELNNLVTECEQKK 415

  Fly   605 L 605
            |
Zfish   416 L 416

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ets96BNP_996290.1 ETS 497..583 CDD:197710 48/85 (56%)
gabpaNP_571662.1 GABP-alpha 40..118 CDD:463311