DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5805 and CG6893

DIOPT Version :10

Sequence 1:NP_651284.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001369058.1 Gene:CG6893 / 40038 FlyBaseID:FBgn0036807 Length:291 Species:Drosophila melanogaster


Alignment Length:210 Identity:45/210 - (21%)
Similarity:82/210 - (39%) Gaps:59/210 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GGCASLVGQTIIVPFDVISQHAMVL----GMSAHAGSKGDINPLGIKSWPGRSRLHISMDIGREI 198
            ||.|..:.|....|||:|....:|:    ||:::.                           ::.
  Fly    21 GGVAGAIAQCFTAPFDLIEARMVVIKKDRGMASNL---------------------------QQA 58

  Fly   199 MRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQ-------DELFRICPVWVSHLFIQCVAGSL 256
            :|..||...|.|.:|.|:..:..::|   .:|||:       |....:..|.|:.| ..||||.:
  Fly    59 IRTHGFISLYDGLSAQLLRQLTYTSM---RFHLYEMGKEHLDDPAGLLDKVLVAAL-AGCVAGVV 119

  Fly   257 GGFTTTILTNPLDIVRARLQVHRLDSMSVA--FRELW-------QEEKLNCFFKGLSARLVQSAA 312
            |        .|::::..|:||:|.......  :|.::       :||.....:.|.....::|:.
  Fly   120 G--------TPMELINTRMQVNRALPKETRWNYRNVFDGLYRVTREEGFTKLYSGCFLSFMRSSL 176

  Fly   313 FSFSIILGYETIKRI 327
            .:.|....|:..|:|
  Fly   177 ITISQNAAYDQAKQI 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5805NP_651284.1 Mito_carr 46..125 CDD:395101
Mito_carr 132..238 CDD:395101 23/110 (21%)
Mito_carr 245..327 CDD:395101 19/90 (21%)
CG6893NP_001369058.1 Mito_carr 20..96 CDD:395101 22/104 (21%)
Mito_carr 98..192 CDD:395101 23/103 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.