DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5805 and Shawn

DIOPT Version :10

Sequence 1:NP_651284.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster


Alignment Length:349 Identity:71/349 - (20%)
Similarity:125/349 - (35%) Gaps:96/349 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PLSMLSS-----FSVRCCLFPLTVIKTQLQVQHKSDV---------------------------- 75
            ||..::|     ....|.:.||.||||:||.|.::.:                            
  Fly    39 PLQQVASACTGAMVTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAA 103

  Fly    76 -----YKGMVDCAMKIYRSEGVPGLYRGFWISSVQ-IVSGVFYISTYEGVRHVLNDLGAGHRMK- 133
                 :.|.:|..:||.|:||:..|:.|...:.:. :.|.:.|...||..:....|:...:..: 
  Fly   104 KPAPRFSGTIDAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRP 168

  Fly   134 ---------------ALAGGGCASLVGQTIIVPFDVISQHAMVLGMSAHAGSKGDINPLGIKSWP 183
                           .|..|....::..|.:.|.::|........|: ||...|.|         
  Fly   169 DTIAHDIPHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMT-HAEMFGTI--------- 223

  Fly   184 GRSRLHISMDIGREIMRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDELFRICPVWVSHLF 248
                        |::::..|..|.:||...:::..||.|.::|..|. |....|.:.....|..|
  Fly   224 ------------RQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTCYE-YLKSSFGVVEPTFSFSF 275

  Fly   249 IQCVAGSLGGFTTTILTNPLDIVRARLQVH-------------RLDSMSVAFR--ELWQEEKLNC 298
               .||::.|.....:|.|.|:|:...|:.             ::.:.|||.|  .:::...:..
  Fly   276 ---AAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMGGVPA 337

  Fly   299 FFKGLSARLVQSAAFSFSIILGYE 322
            .|.||..||.:.|.....:|..:|
  Fly   338 IFSGLGPRLFKVAPACAIMISSFE 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5805NP_651284.1 Mito_carr 46..125 CDD:395101 24/117 (21%)
Mito_carr 132..238 CDD:395101 21/121 (17%)
Mito_carr 245..327 CDD:395101 22/93 (24%)
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 26/119 (22%)
Mito_carr 178..265 CDD:395101 21/109 (19%)
Mito_carr 268..371 CDD:395101 22/97 (23%)

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