DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5805 and CG18324

DIOPT Version :9

Sequence 1:NP_001287513.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_725361.1 Gene:CG18324 / 36568 FlyBaseID:FBgn0033905 Length:307 Species:Drosophila melanogaster


Alignment Length:319 Identity:69/319 - (21%)
Similarity:120/319 - (37%) Gaps:84/319 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PLTVIKTQLQVQHKSDV-------YKGMVDCAMKIYRSEGVPGLYRG--------FWISSVQIVS 108
            |:.|:||::|:|.:...       |:.:....::|..::|:..|.:|        |.::||:   
  Fly    22 PIDVVKTRMQLQGELAARGTYVKPYRHLPQAMLQIVLNDGLLALEKGLAPALCYQFVLNSVR--- 83

  Fly   109 GVFYISTYEGVRHVLNDLGAGHRMKA------------LAGGGCASLVGQTIIVPFDVI--SQHA 159
                :|.|.      |.|..|:...|            .|.|||   .|.....||.:|  .|||
  Fly    84 ----LSVYS------NALELGYLQNADGSISFYRGMFFGALGGC---TGTYFASPFYMIKAQQHA 135

  Fly   160 MVLGMSAHAGSKGDINPLGIKSWPGRSRLHIS-MDIGREIMRRDGFRGFYRGYTASL-MAYVPNS 222
            ..:...|                .|....|.| ||....|.|.:|..||:|....|| ...|.:|
  Fly   136 QAVQSIA----------------VGFQHKHTSMMDALLHIYRTNGISGFWRAALPSLNRTLVASS 184

  Fly   223 AMWWAF---YHLYQDELFRICPVWVSH-LFIQCVAGSLGGFTTTILTNPLDIVRARLQVHRLD-- 281
            .....|   ..|.:|:      .|::| :.:...||...|....:..:|.|::..|:....:|  
  Fly   185 VQIGTFPKAKSLLKDK------GWITHPVLLSFCAGLSSGTLVAVANSPFDVLTTRMYNQPVDEK 243

  Fly   282 -------SMSVAFRELWQEEKLNCFFKGLSARLVQSAAFSFSIILGYETIKRIAVDEQY 333
                   .:...|.::|:.|.::..:||......:||..:....:.:|  |.:.:.::|
  Fly   244 GRGLMYKGLVDCFTKIWRTEGIHGMYKGFWPIYFRSAPHTTLTFVFFE--KLLHLRDRY 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5805NP_001287513.1 Mito_carr 46..125 CDD:395101 16/80 (20%)
Mito_carr 132..238 CDD:395101 31/124 (25%)
Mito_carr 245..327 CDD:395101 17/91 (19%)
CG18324NP_725361.1 Mito_carr 4..87 CDD:278578 15/71 (21%)
PTZ00169 5..293 CDD:240302 67/310 (22%)
Mito_carr 101..201 CDD:278578 30/124 (24%)
Mito_carr 204..296 CDD:278578 17/93 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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