DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5805 and Y43C5B.3

DIOPT Version :10

Sequence 1:NP_651284.1 Gene:CG5805 / 42950 FlyBaseID:FBgn0039223 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_501908.2 Gene:Y43C5B.3 / 177922 WormBaseID:WBGene00012786 Length:341 Species:Caenorhabditis elegans


Alignment Length:337 Identity:117/337 - (34%)
Similarity:183/337 - (54%) Gaps:26/337 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 APTGVGGAAEGATYIRTIEWDMMNKTKFFPLSMLSSFSVRCCLFPLTVIKTQLQVQHKSDVYKGM 79
            |..|..|.:|..|   .:.|:.|:...|:|.::.||:|:|..|:||.|:::|||:|.::.||:..
 Worm    19 AVPGKPGHSEPLT---VVGWEHMDLKLFYPSALFSSWSIRTALYPLAVLRSQLQLQKQNTVYRST 80

  Fly    80 VDCAMKIYRSEGVPGLYRGFWISSVQIVSGVFYISTYEGVRHVLNDLGAGHRMKALAG-----GG 139
            ......|.:.||..||||||||:..||.....|.:.:|..|.||::.|    ::::.|     ||
 Worm    81 FHAYSDISKREGFRGLYRGFWITVPQIGCSFIYSTIFEKCRAVLHEQG----IQSVGGVAAVAGG 141

  Fly   140 CASLVGQTIIVPFDVISQHAMVLGMSAHAGSKGDINPLGIKSWPGRSRLHISMDIG------REI 198
            .||...|:|.||.|:|:|:.|:...:....:..|      ||.....|.|:....|      :.|
 Worm   142 LASFATQSIFVPTDIIAQYMMIYKNTDKLTAGHD------KSVIDGVRNHVKNGSGLGTSVIKAI 200

  Fly   199 MRRDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDELFRICPVW-VSHLFIQCVAGSLGGFTTT 262
            .:.||..|||||:.||...|||....:|..|:.......::.|.. .|.||.|.||.:|||..:|
 Worm   201 YKTDGILGFYRGFWASTAVYVPQMLTFWPSYYWMLGLFNKLHPATNRSLLFDQAVAATLGGVIST 265

  Fly   263 ILTNPLDIVRARLQVHRLDSMSVAFRELWQEEKLNCFFKGLSARLVQSAAFSFSIILGYETIKRI 327
            :.|||:::.|.|||||| .|.|.....:.::||...|.|||:.|::.::.:|..:::|||.:||:
 Worm   266 VATNPMELFRVRLQVHR-GSYSKTLETMLRDEKTAVFTKGLTPRIIANSMYSGLVVVGYEIVKRL 329

  Fly   328 AVDEQYKHQIRW 339
            ...|:|||:::|
 Worm   330 CAKEEYKHRVKW 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5805NP_651284.1 Mito_carr 46..125 CDD:395101 32/78 (41%)
Mito_carr 132..238 CDD:395101 34/116 (29%)
Mito_carr 245..327 CDD:395101 34/81 (42%)
Y43C5B.3NP_501908.2 Mito_carr <56..126 CDD:395101 28/69 (41%)
Mito_carr <195..240 CDD:395101 15/44 (34%)
Mito_carr 255..329 CDD:395101 30/74 (41%)

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