DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42331 and skpo-3

DIOPT Version :10

Sequence 1:NP_651282.2 Gene:CG42331 / 42948 FlyBaseID:FBgn0259233 Length:1615 Species:Drosophila melanogaster
Sequence 2:NP_495511.1 Gene:skpo-3 / 174191 WormBaseID:WBGene00017968 Length:1000 Species:Caenorhabditis elegans


Alignment Length:667 Identity:214/667 - (32%)
Similarity:317/667 - (47%) Gaps:104/667 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PTT--------DSERREMAAYATIAAAKAFRKNFQHIDELARQSHTQRISLR-----RTALEGLC 168
            |||        ::..|::.....:||...:|:..    .:|.:.:|:|.::.     |:.....|
 Worm   385 PTTRSFINTGSNARCRDIINDPIVAAEDMWRERL----VVATEDNTRRQTVDLDQVIRSNTANAC 445

  Fly   169 PPR-DPPPC---MPASERYRTHDGTCNN-KRRPRWGAAQMPFNRFLPPEYGDGVDTVRSSADGST 228
            .|| |...|   :..:..:||.|||||| |..|..||:..|:.|.||..|.:.|    |...||.
 Worm   446 TPRLDEADCEANICYNAMFRTLDGTCNNMKGEPLRGASYRPYTRLLPTIYDNEV----SEPVGSL 506

  Fly   229 LSSSR-----FVSLLVHGAREGEAP-LTLMIAQWGQMLDHDMTSTAQPRSINGSIPS--CCGGKD 285
            .:.:|     ....|.......|:| ...:|.|:||.:.|||..|.       .:||  |...::
 Worm   507 FTDARPSPREITRRLTSSQASVESPDYNALIMQFGQFISHDMAKTT-------LVPSSKCNVCQN 564

  Fly   286 FHPACFPIKVPLDDPWLAPLKVRCLEFLRSAPAQRRDC---VLSWREQTNQVTSYIDASPIYSNS 347
            ....|..:.:..||......:.:|:...||:|.    |   .|..|:|.|:.|.||||||||.:|
 Worm   565 ITSRCMSVPITFDDSNANFRQAQCIRVSRSSPI----CGSGNLKPRQQLNENTGYIDASPIYGSS 625

  Fly   348 AKSSDNARVFRHGLL----VYGRG----DPAEDVCQRGAIATKCIRSGDGRSGEQPGLLAMHHVW 404
            ...|...|....|.|    ..|:.    |  ::.|:.....:....:||.|.....||.|.|.::
 Worm   626 VHDSKKFRDGNSGFLKLPMFNGKAFLPFD--QNKCRNRGQCSVIFTAGDSRVNLFVGLSAWHTIF 688

  Fly   405 VGEHNRIAMELSELNPHWSDEKVYQETRRIVGAMFQHITFREFLPVILGREVVKLFDLELMPSGY 469
            ..||||:......|||||..|::|||.|:::||..|.|.:||:||.:||.....:.       |.
 Worm   689 TEEHNRLVTAFKRLNPHWDGERLYQEARKMIGAQVQAIVYREWLPKVLGASFATVV-------GD 746

  Fly   470 YERYSSKVNPTVANAFAAAAFRFGHSLVQNSYTRCDRHHNVINNNVSLHE-EFQRGDIGS----- 528
            |..|.|.|:.||||.|.:|||||||.::|..|.|.|...    .|:|... .||:|.:.|     
 Worm   747 YRGYDSDVDSTVANEFTSAAFRFGHGMIQEFYQRLDNSF----RNISFGALPFQKGTLHSDVLVN 807

  Fly   529 AGSLHRLLRGLASQRALKRDEFITPELTNHLFQTPGFPFGLDLAAINIQRGRDHGIAPYSAWRVP 593
            .|.:..|:||:.||. :||.:.:|..:|.::|.:      .||:.||||||||||...|..:|..
 Worm   808 EGGVDPLIRGMFSQN-VKRPQRVTTTVTENMFGS------TDLSTINIQRGRDHGHPAYVKYREL 865

  Fly   594 CGLSPILSWDDFA-NVVGPESAKRIGHAYRSVHDIDLFVGGIAERPVVGGLVGPTFACIIAQQFS 657
            ||:....:::..: .::...:..::...|.||..|||:||.:.|.|::.||||||.||||..||.
 Worm   866 CGMGTAFNFEHLSREILNTGTRNKLQEIYGSVDKIDLWVGALLEDPIIRGLVGPTVACIIGPQFK 930

  Fly   658 NSRRGDRFWYENGGFESSFTPAQLHSLRRVSLAQVLCRTVGGGTLQPHIFIPAEFEDNERQTCGV 722
            .:|.||||:|||.|.   |:..||..:|:.||::::|...  .|:..   ||       |:...|
 Worm   931 RTRDGDRFYYENPGV---FSRRQLVEIRKSSLSRIICDNT--NTIST---IP-------REAFRV 980

  Fly   723 GSLSP------IDLSPW 733
            |.:.|      :||:.|
 Worm   981 GHMVPCSQIPSMDLNQW 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42331NP_651282.2 An_peroxidase 183..707 CDD:460804 189/550 (34%)
LHP1 731..>871 CDD:227520 1/3 (33%)
skpo-3NP_495511.1 ShKT 41..75 CDD:214586
An_peroxidase 464..978 CDD:460804 192/563 (34%)
Blue background indicates that the domain is not in the aligned region.

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