DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and Bmp1

DIOPT Version :10

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_112613.1 Gene:Bmp1 / 83470 RGDID:620739 Length:990 Species:Rattus norvegicus


Alignment Length:1049 Identity:424/1049 - (40%)
Similarity:616/1049 - (58%) Gaps:104/1049 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MPMKMKAKLVVLSVGALWMMMFFLVDYAEGRRLSQLPESECDFDFKEQPEDFFGILDSSLVPPKE 71
            ||...:..|.:||   |.:::..|:..| ||.| .|.:...|...::.||         |:..|:
  Rat     1 MPGVARPPLPLLS---LPLLLLLLLPRA-GRPL-DLADYTYDLGEEDAPE---------LLNYKD 51

  Fly    72 P-------------KDDIYQLKTTRQHSGRRRKQSHKSQNKAALRLPPPFLWTDDAVDVLQHSHS 123
            |             ::|:...: .:|.:..|::.:.:|..|||                   .:|
  Rat    52 PCKAAAFLGDIALDEEDLRAFR-VQQAAVLRQQTAQRSSIKAA-------------------GNS 96

  Fly   124 PTL-----NGQPIQ----------RRRRAVTVRKERTWDYGVIPYEIDTIFSGAHKALFKQAMRH 173
            ..|     :|||.:          |.|||.|.|.||.|..||||:.|...|:|:.:|:|:|||||
  Rat    97 SALGRQSTSGQPQRGSRGRWRSRPRSRRAATSRPERVWPDGVIPFVIGGNFTGSQRAVFRQAMRH 161

  Fly   174 WENFTCIKFVERDPNLHANYIYFTVKNCGCCSFLGKNGNGRQPISIGRNCEKFGIIIHELGHTIG 238
            ||..||:.|:||..  ..:||.||.:.|||||::|:.|.|.|.||||:||:||||::|||||.||
  Rat   162 WEKHTCVTFLERTD--EDSYIVFTYRPCGCCSYVGRRGGGPQAISIGKNCDKFGIVVHELGHVIG 224

  Fly   239 FHHEHARGDRDKHIVINKGNIMRGQEYNFDVLSPEEVDLPLLPYDLNSIMHYAKNSFSKSPYLDT 303
            |.|||.|.|||:|:.|.:.||..||||||..:..:||:.....||.:||||||:|:||:..:|||
  Rat   225 FWHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEVQEVESLGETYDFDSIMHYARNTFSRGIFLDT 289

  Fly   304 ITPIGIPPGTHLELGQRKRLSRGDIVQANLLYKCASCGRTYQQNSGHIVSPHFIYSGNGVLSEFE 368
            |.|.....|....:|||.|||:|||.||..||||.:||.|.|.::|:..||.:   .||      
  Rat   290 IVPKYEVNGVKPSIGQRTRLSKGDIAQARKLYKCPACGETLQDSTGNFSSPEY---PNG------ 345

  Fly   369 GSGDAGEDPSAESEFDASLTNCEWRITATNGEKVILHLQQLHLMSSDDCTQDYLEIRDGYWHKSP 433
                          :.|.: :|.|||:.|.|||:||:...:.|..|..|..||:|:|||:|.|:|
  Rat   346 --------------YSAHM-HCVWRISVTPGEKIILNFTSMDLYRSRLCWYDYVEVRDGFWRKAP 395

  Fly   434 LVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYRGFKARFEVVCGGDLKLTKDQS-IDSPNYPM 497
            |..|.||....|.|.:..||:.:.:.:.:...| :||.|.:|.:||||:|  ||.. |.|||||.
  Rat   396 LRGRFCGGKLPEPIVSTDSRLWVEFRSSSNWVG-KGFFAVYEAICGGDVK--KDNGHIQSPNYPD 457

  Fly   498 DYMPDKECVWRITAPDNHQVALKFQSFELEKHDGCAYDFVEIRDGNHSDSRLIGRFCGDKLPPNI 562
            ||.|.|.|:|||...:...|.|.|||||:|:||.||||::|:|||:...|.||||:||.:.|.:|
  Rat   458 DYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLEVRDGHSESSNLIGRYCGYEKPDDI 522

  Fly   563 KTRSNQMYIRFVSDSSVQKLGFSAALMLDVDECKFTDH-GCQHLCINTLGSYQCGCRAGYELQAN 626
            |:.|::::::||||.|:.|.||:.....:||||...:. ||:..|:||||||:|.|..||||..:
  Rat   523 KSTSSRLWLKFVSDGSINKAGFAVNFFKEVDECSRPNRGGCEQRCLNTLGSYKCSCDPGYELAPD 587

  Fly   627 GKTCEDACGGVVDATKSNGSLYSPSYPDVYPNSKQCVWEVVAPPNHAVFLNFSHFDLEGTRFHYT 691
            .:.||.||||.:  ||.|||:.||.:|..||.:|.|:|::|||..:.:.|.|..|:.||.    .
  Rat   588 KRRCEAACGGFL--TKLNGSITSPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGN----D 646

  Fly   692 KCNYDYLIIYSKM-RDNRLKKIGIYCGHELPPVVNSEQSILRLEFYSDRTVQRSGFVAKFVIDVD 755
            .|.||::.:.|.: .|::|.  |.:||.|.|.|:.|:.:.:|:||.||.||.:.||.|.|..|.|
  Rat   647 VCKYDFVEVRSGLTADSKLH--GKFCGSEKPEVITSQYNNMRVEFKSDNTVSKKGFKAHFFSDKD 709

  Fly   756 ECSMNNGGCQHRCRNTFGSYQCSCRNGYTLAENGHNCTETRCKFEITTSYGVLQSPNYPEDYPRN 820
            |||.:|||||..|.||||||:|.||:|:.|.:|.|:|.|..|:.::|::.|.:.|||:|:.||..
  Rat   710 ECSKDNGGCQQDCVNTFGSYECQCRSGFVLHDNKHDCKEAGCEHKVTSTSGTITSPNWPDKYPSK 774

  Fly   821 IYCYWHFQTVLGHRIQLTFHDFEVESHQECIYDYVAIYDGRSENSSTLGIYCGGREPYAVIASTN 885
            ..|.|...:..|||::|||.:.::||..||.||::.::|||...:..||.:||.::|..|:|:.|
  Rat   775 KECTWAISSTPGHRVKLTFVEMDIESQPECAYDHLEVFDGRDAKAPVLGRFCGSKKPEPVLATGN 839

  Fly   886 EMFMVLATDAGLQRKGFKATFVSECGGYLRATNHSQTFYSHPRYGSRPYKRNMYCDWRIQADPES 950
            .||:...:|..:|||||:|:..:||||.:||...::..|||.::|...|...:.|:|.|.|:...
  Rat   840 RMFLRFYSDNSVQRKGFQASHSTECGGQVRADVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGY 904

  Fly   951 SVKIRFLHFEIEYSERCDYDYLEITEEGYSMNTIH-GRFCGKHKPPIIISNSDTLLLRFQTDESN 1014
            .|::.|..||:|....|.|||:|:. :||...... ||:||...|..:.|..|::|::|.:|::.
  Rat   905 GVELVFQTFEVEEETDCGYDYMELF-DGYDSTAPRLGRYCGSGPPEEVYSAGDSVLVKFHSDDTI 968

  Fly  1015 SLRGFAISF 1023
            |.:||.:.:
  Rat   969 SKKGFHLRY 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 108/200 (54%)
CUB 388..474 CDD:214483 34/85 (40%)
CUB 478..586 CDD:395345 58/108 (54%)
FXa_inhibition 595..630 CDD:464251 16/35 (46%)
CUB 634..750 CDD:395345 47/116 (41%)
FXa_inhibition 757..792 CDD:464251 21/34 (62%)
CUB 797..906 CDD:395345 43/108 (40%)
CUB 910..1023 CDD:395345 39/113 (35%)
Bmp1NP_112613.1 ZnMc_BMP1_TLD 125..324 CDD:239808 108/200 (54%)
CUB 326..435 CDD:395345 44/133 (33%)
CUB 439..548 CDD:395345 58/110 (53%)
FXa_inhibition 559..591 CDD:464251 15/31 (48%)
CUB 595..704 CDD:395345 47/116 (41%)
FXa_inhibition 711..746 CDD:464251 21/34 (62%)
CUB 751..860 CDD:395345 43/108 (40%)
CUB 864..977 CDD:395345 39/113 (35%)

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