DRSC/TRiP Functional Genomics Resources

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Protein Alignment tld and Semp1

DIOPT Version :10

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster


Alignment Length:238 Identity:68/238 - (28%)
Similarity:110/238 - (46%) Gaps:31/238 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 DVLQHSHSPTLNGQPIQRRRRAVTVRKERTWDYGVIPYEI-DTIFSGAHKALFKQAMRHWENFTC 179
            ::|...:...:...||  |.|...|.:...|....:||.| |..|:.:|.....:|:...|..:|
  Fly    25 ELLAGFYQGDIKAHPI--RTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSC 87

  Fly   180 IKFVERDPNLHANY---IYFTVKNCGCCS-FLGKNGNGRQPIS-----IGRNCEKFGIIIHELGH 235
            :.|   .|....::   :..|.|..||.: .||.. |..|.::     :|..|.:.|.|||||.|
  Fly    88 VIF---KPATEMDFPMALVITSKGLGCNTVHLGYR-NKTQVVNLEIYPLGEGCFRIGSIIHELLH 148

  Fly   236 TIGFHHEHARGDRDKHIVINKGNIMRGQEYNFDVLSPE------EVDLPLLPYDLNSIMHYAKNS 294
            .:||.|:|...:||:::.|...||  ..:||.:.::.:      :.|   ..||..|:|||...:
  Fly   149 VLGFEHQHVSQNRDQYVSIQWKNI--NPQYNINFVNNDNSTAWHDFD---EGYDYESVMHYVPRA 208

  Fly   295 FSKSPYLDTITPIGIPPGTHLELGQRKRLSRGDIVQANLLYKC 337
            ||::.. .||.|  :..|.. .:|||..:|..||.:.|.:|:|
  Fly   209 FSRNGQ-PTIVP--LREGAE-NMGQRFYMSEKDIRKLNKMYRC 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 63/217 (29%)
CUB 388..474 CDD:214483
CUB 478..586 CDD:395345
FXa_inhibition 595..630 CDD:464251
CUB 634..750 CDD:395345
FXa_inhibition 757..792 CDD:464251
CUB 797..906 CDD:395345
CUB 910..1023 CDD:395345
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 59/202 (29%)
Blue background indicates that the domain is not in the aligned region.

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