DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and Cdcp2

DIOPT Version :9

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:XP_038967409.1 Gene:Cdcp2 / 298306 RGDID:1563467 Length:566 Species:Rattus norvegicus


Alignment Length:478 Identity:135/478 - (28%)
Similarity:212/478 - (44%) Gaps:92/478 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   606 CINTLGSYQCGCRAGYELQANGKTCEDACGGVVDATKSNGSLYSPSYPDVYPNSKQCVWEVVAPP 670
            |:..:.:.....:..:.|.:..|     ||||:.|...|.|  ||::|.:||.:.:|.|.:|...
  Rat    33 CLTRIQNPGADSQPSFSLASGVK-----CGGVLSAPSGNFS--SPNFPSLYPYNTECSWLIVVAE 90

  Fly   671 NHAVFLNFSHFDLEGTRFHYTKCNYDYLIIYSKMRDNRLKKIGIYCGHELPPVVNSEQSILRLEF 735
            ..:|.|.|..||||   :|.| |.:|:|.||:....::...:|.:||...||...|...::.:.|
  Rat    91 GSSVLLTFHTFDLE---YHDT-CGFDFLEIYNGASRDKGNLLGRFCGQAPPPPFTSSWHVMSVVF 151

  Fly   736 YSDRTVQRSGFVAKFVIDVDECSMNNGGCQHRCRNTFGSYQCSCRNGYTLAENGHNCTETRCKFE 800
            :||:.|...||.|.:..||                                          |...
  Rat   152 HSDKHVASRGFSAGYQKDV------------------------------------------CGGV 174

  Fly   801 ITTSYGVLQSPNYPEDYPRNIYCYWHFQTVLGHRIQLTFHDFEVESHQECIYDYVAIYDGRSENS 865
            :|...|:|.||.||.:||.|:.|:|..:......::|.|.||:||..:||:||:|.:        
  Rat   175 LTGLSGILSSPEYPNNYPNNVECHWLIRASGPATVKLVFVDFQVEGSEECMYDHVTV-------- 231

  Fly   866 STLGI--------YCGGREPYAVIASTNEMFMVLATDAGLQRKGFKATFVS-ECGGYLRATNHSQ 921
              ||.        |||...|..:::..:|:.:|..:|..:..:||||.:.| ||.....|...: 
  Rat   232 --LGAPGPAHGHHYCGSTRPPTLVSLGHELQVVFKSDFNIGGRGFKAHYFSGECQEVFTAVRGN- 293

  Fly   922 TFYSHPRYGSRPYKRNMYCDWRIQADPESSVKIRFLHFEIE----YSERCDYDYLEITEEGYSMN 982
              :|.|:|.. .|..|:.|.|.|:..|...||:..|...:|    .:..||:|:|...:......
  Rat   294 --FSSPQYPG-AYPNNIRCHWTIRLPPGYRVKVFVLDLGLEEPNSLTRTCDFDHLAAFDGASEEA 355

  Fly   983 TIHGRFCGKHKPPIIISNSDTLLLRFQTDESNSLRGFAISFMAVDPPEDSVGE-DF------DAV 1040
            .:.|::||.|.||.:.|:.:.|||...||.|.|.|||:::::.|.|...|... ||      .|:
  Rat   356 KLLGKWCGHHLPPPVTSSHNQLLLLLHTDRSTSGRGFSVAYIGVVPMNVSCSRTDFQILISAQAL 420

  Fly  1041 TPFPG---YL--KSMYSSETGSD 1058
            .|...   ||  :|..:.|.||:
  Rat   421 APLERTKVYLGSRSCAAQEVGSN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808
Astacin 144..339 CDD:279708
CUB 388..474 CDD:214483
CUB 478..586 CDD:278839
FXa_inhibition 595..630 CDD:291342 3/23 (13%)
CUB 634..750 CDD:278839 42/115 (37%)
FXa_inhibition 757..792 CDD:291342 0/34 (0%)
CUB 797..906 CDD:278839 37/116 (32%)
CUB 910..1023 CDD:278839 36/116 (31%)
Cdcp2XP_038967409.1 CUB 56..167 CDD:238001 42/116 (36%)
CUB 171..280 CDD:238001 37/118 (31%)
CUB 283..396 CDD:238001 36/116 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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