DRSC/TRiP Functional Genomics Resources

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Protein Alignment tld and clec-4

DIOPT Version :10

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_496688.1 Gene:clec-4 / 189654 WormBaseID:WBGene00012583 Length:425 Species:Caenorhabditis elegans


Alignment Length:569 Identity:102/569 - (17%)
Similarity:170/569 - (29%) Gaps:212/569 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 CEWRITATNGEKVILHLQQLHLMSSDDCTQDYLEIRDGYWHKSPLVRRICGNVSGEVITTQTS-- 452
            |....|..||:                |.:.::::..   |.:  ..:.|......::|.:.|  
 Worm    27 CTSGFTLINGK----------------CLRIFVDVST---HTA--AEKTCKGYGATLVTVKNSID 70

  Fly   453 -RMLLNYVNRNAAKGYRGFKARFEVVCGGDLKLTKDQSIDSPNYPMDYMPDKECVWRITAPDNHQ 516
             |.:.::...||...:.|.                        |..|....| |:|     |:  
 Worm    71 NRAIADFTGNNANLFWMGL------------------------YCFDSDVSK-CLW-----DD-- 103

  Fly   517 VALKFQSFELEKHDGCAYDFVEIRDGNHSDSRLIGRFCGDKLPPNIKTRSNQMYIRFVSDSSVQK 581
                 .:...|.:|..|..|..|..||.....:.|...|..|..:...|.          |.:.:
 Worm   104 -----ATGSAEVYDNFAAGFPHIALGNCVYYSVQGALAGMWLSSDCNDRR----------SFICE 153

  Fly   582 LGFSAALMLDVDECKFTDHGCQHLCINTLGSYQCGCRAGYELQANGKTCEDACGGVVDATKSNGS 646
            |..|.|     |.|.:..:|..:...||..:|..|          .|.||..||.:.....:|.:
 Worm   154 LPASHA-----DPCPYNYNGFCYTFHNTASTYTKG----------QKICEQECGNLASIHSANEN 203

  Fly   647 LYSPSY-----------------PDVYPNSKQCVWEVVAPPNHAVFLNFSHFDLEGTRFHYTKCN 694
            .|..::                 .|||......:||            :.:||....|       
 Worm   204 RYIMTFGGRATKEDLLLGGMWPADDVYNWVDGSLWE------------YENFDPINVR------- 249

  Fly   695 YDYLIIYSKMRDNRLKKIGIYCGHELPPVVNSEQSILRLEFYSDRTVQRSGFVAKFVIDVDECSM 759
             |.:.:.....|:|...:|::                                            
 Worm   250 -DSVCVIMSNGDSRPIALGMW-------------------------------------------- 269

  Fly   760 NNGGCQHRCRNTFGSYQCSCRNGYTLA---ENGHNCTETRCKFEITTSYGV-------------L 808
                           |...|:|.|::.   ..|..|........:|....|             :
 Worm   270 ---------------YSGECKNEYSVVCKRPAGIQCPPNPTIVPVTPMPAVQSFCNSSVMAPSEI 319

  Fly   809 QSPNYPEDYPRNIYCYWHFQTVLGHRIQLTFHDFEVESHQECIYDYVAIYDGRSENSSTLGIYCG 873
            .||::|.:|..:.:|.:...|:..:.:.|.|..|:.|.    :.|.|.:|||.|.|...:|:|.|
 Worm   320 TSPHFPYNYYNSDFCSYQISTLGSYNVLLRFSTFDTEK----VNDVVTVYDGDSTNDPVIGVYAG 380

  Fly   874 GREPYAVIASTNEMFMVLATDAGLQRKGFKATFVSECGGYLRATNHSQT 922
            ...|:.||::.|:|.:...||....|:||..          |.|::|.|
 Worm   381 SFYPFTVISTGNKMLVTFKTDKSNTRQGFSG----------RITSYSTT 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808
CUB 388..474 CDD:214483 13/86 (15%)
CUB 478..586 CDD:395345 19/107 (18%)
FXa_inhibition 595..630 CDD:464251 7/34 (21%)
CUB 634..750 CDD:395345 16/132 (12%)
FXa_inhibition 757..792 CDD:464251 5/37 (14%)
CUB 797..906 CDD:395345 32/121 (26%)
CUB 910..1023 CDD:395345 4/13 (31%)
clec-4NP_496688.1 CLECT 27..153 CDD:214480 31/193 (16%)
CLECT 162..283 CDD:214480 29/209 (14%)
CUB 309..415 CDD:238001 31/119 (26%)
Blue background indicates that the domain is not in the aligned region.

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