DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and nas-1

DIOPT Version :10

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_499768.2 Gene:nas-1 / 185811 WormBaseID:WBGene00003520 Length:270 Species:Caenorhabditis elegans


Alignment Length:233 Identity:75/233 - (32%)
Similarity:114/233 - (48%) Gaps:28/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 PTLNGQ-----------PIQRRRR----AVTVRKERTWDYGVIPYEIDTIFSGAHKALFKQAMRH 173
            ||.|.:           |.||.:|    ||...|:: |..|.:||.:...::.|.:|:..:|...
 Worm    44 PTTNTRRVRSLYHDMRIPFQRFKRGGGVAVAAEKDK-WPNGRVPYILSAAYTSAQRAVLARAFDT 107

  Fly   174 WENFTCIKFVERDPNLHANYIYFTVKNC-GCCSFLGKNGNGRQPISIGRNCEKFGIIIHELGHTI 237
            :...|||:||.:.|   |:..|..::.. ||.:...:.| |||.:|:...|..:..|||||.|.|
 Worm   108 YAKRTCIRFVPKSP---ADKDYIVIQKLDGCYADFSRVG-GRQQVSLADECIDYATIIHELMHVI 168

  Fly   238 GFHHEHARGDRDKHIVINKGNIMRGQEYNFDVLSPEEVDLPLLPYDLNSIMHYAKNSFSKSPYLD 302
            ||.|||.|.|||.::.|...|:::|...:||.||...:......||.:|||||..|..|::. .:
 Worm   169 GFIHEHQREDRDSYVSILYQNVIQGANTDFDKLSNLGLSYYGEHYDYSSIMHYEANEGSRNG-KN 232

  Fly   303 TITPIGIPPGTHLE--LGQRKRLSRGDIVQANLLYKCA 338
            ||.    ...:|..  :|:....|..|:.:.|..|||:
 Worm   233 TIE----AKNSHFTAIMGKASDFSTSDLRRVNRAYKCS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 67/203 (33%)
CUB 388..474 CDD:214483
CUB 478..586 CDD:395345
FXa_inhibition 595..630 CDD:464251
CUB 634..750 CDD:395345
FXa_inhibition 757..792 CDD:464251
CUB 797..906 CDD:395345
CUB 910..1023 CDD:395345
nas-1NP_499768.2 ZnMc_astacin_like 82..263 CDD:239807 61/189 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.