DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and nas-13

DIOPT Version :9

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_510549.3 Gene:nas-13 / 185492 WormBaseID:WBGene00003532 Length:450 Species:Caenorhabditis elegans


Alignment Length:434 Identity:121/434 - (27%)
Similarity:180/434 - (41%) Gaps:90/434 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MPMKMKAKLVVLSVGALWMMMFF---LVDYAEGRRL--SQLPESE---CDFD------FKEQPED 57
            ||....:...|.|....::...|   ...||:..|.  ..:||.|   .|:|      |:|..:.
 Worm     1 MPSPTSSSASVFSSHLFFVFCIFSQIAQSYAQFNRFFDPSIPEQETVLTDYDYNMIGHFRENDQW 65

  Fly    58 FFGILDSSLVPPKEPKDDIYQLKTTRQHSGRRRKQSHKSQNKAALRLPPPFLWTDDAVDVLQHSH 122
            |  :.||::..|...:.||       .:||...:..:..                       ...
 Worm    66 F--VNDSAMYNPLRFEGDI-------ANSGLNSRSINTF-----------------------FGD 98

  Fly   123 SPTLNGQPIQRRRRAVTVRKERTWDYGVIPYEIDTIFSGAHKALFKQAMRHWENFTCIKFVERDP 187
            ||......:||.....|..|   |:...|||.|.:.:|...::...:|:..:...|||.|..:..
 Worm    99 SPLFGIFGVQRNAVRQTYLK---WEQARIPYTISSQYSSYSRSKIAEAIEEYRKKTCIDFSPKSA 160

  Fly   188 NLHANYIYFTVKNCGCCSFLGKNGNGRQPISIGRNCEKFGIIIHELGHTIGFHHEHARGDRDKHI 252
            . ..:||:. |.:.||.|.:|:.| |:||:|:|..|.:.|||||||.|.:||.||.:|.|||:::
 Worm   161 G-DLDYIHI-VPDDGCYSLVGRIG-GKQPVSLGDGCIQKGIIIHELMHAVGFFHEQSRADRDEYV 222

  Fly   253 VINKGNIMRGQEYNFDVLSPEEVDLPLLPYDLNSIMHYAKNSFSKS--PYLDTITPIGIPPGTHL 315
            .||..|:..|.:..||..|...:|.....||..|:||||..:|||:  |   ||.||    ..::
 Worm   223 KINWSNVEAGLQDQFDKYSLNMIDHLGTKYDYGSVMHYAPTAFSKNGKP---TIEPI----EKNV 280

  Fly   316 ELGQRKRLSRGDIVQANLLYKCASCGRT--YQQNSGHIVS-PHFIYSGNG--------VLSEFEG 369
            |:|||...|..||.:.|:||.|.:...|  ..:|:..:.| ...:.|..|        :.|....
 Worm   281 EIGQRAGFSENDIYKINMLYNCPTFTATTLAPENTKRVKSITKKVTSATGSPLSKKGEIGSSIGD 345

  Fly   370 SGDAG------------------EDPSAESEFDASLTNCEWRIT 395
            .||.|                  ||...:.||.|...:||.|.:
 Worm   346 KGDRGDNSVLSSLISIHSGLGKCEDRRKDCEFLARAGHCESRFS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 76/202 (38%)
Astacin 144..339 CDD:279708 75/196 (38%)
CUB 388..474 CDD:214483 3/8 (38%)
CUB 478..586 CDD:278839
FXa_inhibition 595..630 CDD:291342
CUB 634..750 CDD:278839
FXa_inhibition 757..792 CDD:291342
CUB 797..906 CDD:278839
CUB 910..1023 CDD:278839
nas-13NP_510549.3 Astacin 118..304 CDD:279708 76/198 (38%)
ZnMc_astacin_like 122..300 CDD:239807 71/187 (38%)
ShK 367..404 CDD:279838 8/23 (35%)
ShK 414..450 CDD:279838
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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