DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and nas-24

DIOPT Version :10

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_506409.2 Gene:nas-24 / 184744 WormBaseID:WBGene00003543 Length:396 Species:Caenorhabditis elegans


Alignment Length:474 Identity:100/474 - (21%)
Similarity:148/474 - (31%) Gaps:173/474 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 FLWTDDAVDVLQHSHSPTLNGQPIQRRRRAVTVRKERTWDYGVIP-YEIDTIFSGAHKALFKQAM 171
            ||.:..|...|...:...:.|....:|.:....|....|..|.|. |..|.  :.:.|...|.|:
 Worm    12 FLLSSYAYCGLSRFNEHDIEGGDSYKRVKREFERLGSKWLGGTINYYYADN--NNSVKEKVKSAI 74

  Fly   172 RHWENFTCIKFVERDPNLHANYIYFTVKNCGCCSFLGKNGN-----GRQPISIGRNCEKFGIIIH 231
            .:..|.|||||.| ||........||.:...|.|.:|..|.     |...:..|. |...|.|:|
 Worm    75 AYIANHTCIKFNE-DPTHWQRLKIFTSELSHCRSTIGAPGTRSGSAGELSMETGW-CANIGSIVH 137

  Fly   232 ELGHTIGFHHEHARGDRDKHIVINK---------------------GNIMRGQEYNFDVLSPEEV 275
            |..|::|.:|||.|.|||..:.:..                     |:||.....|:.|...|  
 Worm   138 EFSHSLGRYHEHTRPDRDNSLKVTSTDYEARPRPWGMTTMYGPFEHGSIMMYHSSNYGVGKME-- 200

  Fly   276 DLPLLPYDLNSIMHYAKNSFSKSPYLDTITPIGIPPGTHLELGQRKRLSRGDIVQANLLYKCASC 340
                 |||    |.| ||:                      :|.| |::..|:.:.|..|.| .|
 Worm   201 -----PYD----MEY-KNT----------------------MGSR-RVTFYDMYKINQYYGC-GC 231

  Fly   341 GRTYQQNSGHIVSPHFIYSGNGVLSEFEGSGDAGEDPSAESEFDASLTNCEWRITATNGEKVILH 405
            ....:..:|...||.                            |.|..||.......        
 Worm   232 STQLECKNGGYTSPS----------------------------DCSRCNCPKGFFGK-------- 260

  Fly   406 LQQLHLMSSDDCTQDYLEIRDGY--WHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYR 468
                  :.::...||..|::..|  |                    ||..:..||.....:.   
 Worm   261 ------LCNERRQQDSYELKATYGRW--------------------QTQTISFNYKPEPVSD--- 296

  Fly   469 GFKARFEVVCG---GDLKLTKDQSIDSPNYPMDYMPDKECVWRITAPDNHQVALKFQSFELEKHD 530
            ||.:.|..:.|   ..:::|           |:.:.:..|    ||                   
 Worm   297 GFYSTFVYITGEANSTIEIT-----------MEGLENVIC----TA------------------- 327

  Fly   531 GCAYDFVEIRDGNHSDSRL 549
            ||.::.|||:  :..|||:
 Worm   328 GCTWNGVEIK--SREDSRI 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 59/227 (26%)
CUB 388..474 CDD:214483 13/87 (15%)
CUB 478..586 CDD:395345 14/75 (19%)
FXa_inhibition 595..630 CDD:464251
CUB 634..750 CDD:395345
FXa_inhibition 757..792 CDD:464251
CUB 797..906 CDD:395345
CUB 910..1023 CDD:395345
nas-24NP_506409.2 Astacin 49..231 CDD:426242 59/221 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.