DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and nas-38

DIOPT Version :9

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001359993.1 Gene:nas-38 / 180407 WormBaseID:WBGene00003554 Length:727 Species:Caenorhabditis elegans


Alignment Length:727 Identity:159/727 - (21%)
Similarity:236/727 - (32%) Gaps:245/727 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 RTWD-YGVIPYEIDTIFSGAHKALFKQAMRHWENFTCIKFVERDPNLHANYIYFTVKNCGCCSFL 207
            :.|| .|.|.::.........:...:.||..|:..||::|.|..||:.....:   ...||.||:
 Worm   122 KKWDTRGPISFDYAESIPFQTRQKIRSAMLLWQQHTCLRFEEGGPNVDRLEFF---DGGGCSSFV 183

  Fly   208 GKNGNGRQPISIGR-NCEKFGIIIHELGHTIGFHHEHARGDRDKHIVINKGNIMRGQEYNFDVLS 271
            |:.| |.|.|||.. .|:..|||.||:||.:|..||.||.|:::||.||..||...:..||..:.
 Worm   184 GRVG-GTQGISISTPGCDVVGIISHEIGHALGIFHEQARPDQERHIAINYNNIPLSRWNNFQAVG 247

  Fly   272 PEEVDLPLLPYDLNSIMHYAKNSFSKSPYLDTITPI-GIPPGTHLELGQRKRLSRGDIVQANLLY 335
            ....:...||||..|:|||....|:..||..||..: .:...|   :|||...|..|....|:.|
 Worm   248 ENHAETYNLPYDTGSVMHYGPYGFASDPYTPTIRTLERVQQST---IGQRAGPSFLDYQAINMAY 309

  Fly   336 KCASCGRTYQQNSGHIVSPHFIYSGNGVLSEFEGSGDAGEDPSAESEFDASLTNCEWRITATNGE 400
            .|                                                               
 Worm   310 GC--------------------------------------------------------------- 311

  Fly   401 KVILHLQQLHLMSSDDCTQDYLEIRDGYWHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAK 465
                         ::.|. |...:|:||.|.:......|.                         
 Worm   312 -------------TESCA-DLPCLRNGYTHPNNCSMCACP------------------------- 337

  Fly   466 GYRGFKARF-------EVVCGGDLKLTKD-QSIDSPNYPMDYMPDKECVWRITAPDNHQVALKFQ 522
              .|...|:       ...|||.:..||: :.|.|||||..:..|.||.|.|.||...:|.::|:
 Worm   338 --EGLSGRYCEQVYPSNAQCGGVIFATKEVKYITSPNYPDKFPIDTECNWIIAAPIEGRVFMEFE 400

  Fly   523 -SFELEKHDGCAYDFVEIRDGNHSDSRLIG-RFCGDKLPPNIKTRSNQMYIRFVSDSSVQKL--- 582
             .|:....|.|...:||::  .|||.||.| |:|...||.|          ||:|..:...:   
 Worm   401 GDFDFLCEDTCDKAYVEVK--YHSDKRLTGARYCCSLLPKN----------RFISFKNEMIIIMR 453

  Fly   583 -------GFSAALMLD-----------------VDECKFTDHGCQHLCINTLGSYQCGC--RAGY 621
                   ||.|....:                 :.|...|....:...:.:..:|....  |...
 Worm   454 GYRSSGAGFKAKFWSNLGEPEGVSTPLPPTTAPLPEISETTQKPEPTTVQSTTTYTTAIPRRTAK 518

  Fly   622 E--------------LQANGKTCEDACGGVVDATKSNGSLYSPSYPDVYPNSKQCVWEVVAPPNH 672
            :              |.::..|.|..   .|.:| :..:.:.|:.|.......:.   ..|.|..
 Worm   519 KQFFTRKPITIPLTPLTSSSTTTEST---TVSST-TQSTTWLPTEPSFATGETEI---TTASPTI 576

  Fly   673 AVFLNFSHFDLEGTRFHYTKCNYDYLIIYSKMRDNRLKKI----GIYCGHELPPVVNSEQSILRL 733
            .:|.:.|..                           |..|    |:....:.|.::||.     |
 Worm   577 TLFPSLSTI---------------------------LPPINSLAGVLPSTQAPDIINSV-----L 609

  Fly   734 EFYSDRTVQRSGFVAKFVIDVDECSMNNGGCQHRCRNTFGSYQC---SCRN------GYTLAENG 789
            |.......:..|          |||...|||.||.|..    :|   :||.      .::...:|
 Worm   610 ECGCGAWSEWQG----------ECSQQCGGCGHRLRKR----ECKKEACRKEEKRPCNFSACPDG 660

  Fly   790 HNCTETRCKFEI 801
            .|......:|.|
 Worm   661 TNFLINNAEFHI 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 67/196 (34%)
Astacin 144..339 CDD:279708 68/197 (35%)
CUB 388..474 CDD:214483 8/85 (9%)
CUB 478..586 CDD:278839 41/120 (34%)
FXa_inhibition 595..630 CDD:291342 4/50 (8%)
CUB 634..750 CDD:278839 17/119 (14%)
FXa_inhibition 757..792 CDD:291342 12/43 (28%)
CUB 797..906 CDD:278839 2/5 (40%)
CUB 910..1023 CDD:278839
nas-38NP_001359993.1 Astacin 122..313 CDD:366617 68/273 (25%)
CUB 367..466 CDD:214483 37/110 (34%)
TSP1 613..658 CDD:214559 13/58 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.