DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tld and nas-9

DIOPT Version :9

Sequence 1:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_741532.1 Gene:nas-9 / 178875 WormBaseID:WBGene00003528 Length:546 Species:Caenorhabditis elegans


Alignment Length:203 Identity:62/203 - (30%)
Similarity:93/203 - (45%) Gaps:13/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 WD-YGVIPYEIDTIFSGAHKALFKQAMRHWENFTCIKF-VERDP-NLHANYIYF-TVKNCGCCSF 206
            || :..|.|.:|.....:.|...:.|:......|||.| ....| ..|.||:.. :...|| .|:
 Worm   313 WDIWKPIQYTLDDSLEESDKKDIRDALHEISINTCILFRYNATPKGYHLNYMKVDSTTFCG-LSY 376

  Fly   207 LGKNGNGRQPISIGRNC-EKFGIIIHELGHTIGFHHEHARGDRDKHIVINKGNIMRGQEYNFDVL 270
            :|:. :...||.:...| :..|:.:||..|.:|..|:|.|.||||:|.|:..||   ...::|..
 Worm   377 VGRT-DPANPIYLSFQCGDNRGVAMHETMHALGVSHQHLRLDRDKYIKIDWSNI---DPQHYDTF 437

  Fly   271 SPEEVDLPL---LPYDLNSIMHYAKNSFSKSPYLDTITPIGIPPGTHLELGQRKRLSRGDIVQAN 332
            :..:..|..   ..|..:|||||.....:|.|...|:.|:..|.....:||||.:|:||||....
 Worm   438 AISDAKLYTSYGTKYAYDSIMHYNAYLGAKDPNKPTMIPLVNPQENTPKLGQRAKLTRGDIRLLK 502

  Fly   333 LLYKCASC 340
            .:|....|
 Worm   503 KMYCRPGC 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 61/199 (31%)
Astacin 144..339 CDD:279708 61/200 (31%)
CUB 388..474 CDD:214483
CUB 478..586 CDD:278839
FXa_inhibition 595..630 CDD:291342
CUB 634..750 CDD:278839
FXa_inhibition 757..792 CDD:291342
CUB 797..906 CDD:278839
CUB 910..1023 CDD:278839
nas-9NP_741532.1 Astacin 311..505 CDD:279708 60/196 (31%)
ZnMc_astacin_like 316..505 CDD:239807 58/193 (30%)
ShKT 510..546 CDD:214586 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.