DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tok and Cubn

DIOPT Version :9

Sequence 1:NP_001287510.1 Gene:tok / 42944 FlyBaseID:FBgn0004885 Length:1464 Species:Drosophila melanogaster
Sequence 2:NP_001074553.1 Gene:Cubn / 65969 MGIID:1931256 Length:3623 Species:Mus musculus


Alignment Length:753 Identity:221/753 - (29%)
Similarity:323/753 - (42%) Gaps:159/753 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 SQGDIAQANLLYKCPKCGRTFQ--------------ESSGIFAS---PSHYTAGALSNETEHCEW 754
            |..||....|.....:.||.|:              ::|||..|   |:.|      ::.:.|.|
Mouse  1250 SSKDIVLLKLRTDAGQQGRGFEINYR
QTCDNVVIVNKTSGILESINYPNPY------DKDQRCNW 1308

  Fly   755 RITATYGERVELKLENMNIFKSNNCETDYLEIRDGYFEKSPLIGRFCGKVDKEVIRTESSRMLLT 819
            .|.||.|..|.......::....||.|||||:.||    ...|||:||:.......|..|::::.
Mouse  1309 TIQATTGNTVNYTFLEFDVENYVNCSTDYLELYDG----PQRIGRYCGENIPPPGATTGSKLIVV 1369

  Fly   820 YVNTHRIEGFRGFKAEFDV-VCGGELSVDDAVGRLESPNYPLDYLPNKECVWKITVPESYQVALK 883
            :.......|.:|||..:.: .||||:|  ..:|...||.||..|..||||:|.|.|.....:.|.
Mouse  1370 FHTDGVDSGEKGFKMHWFI
HGCGGEMS--GTMGSFSSPGYPNSYPHNKECIWNIRVAPGNSIQLT 1432

  Fly   884 FQSFEVENHDSCVYDYVEVRDGPGQDAPLIGVFCGYKP---PPNMKSSGNSMYVKFVSDTSVQKA 945
            ...|:||.|.||.||.:|:..|....:|.|...|...|   |..:.|:.|.:.::|.:|:|:...
Mouse  1433 IHDFDVEYHASCKYDTLEIYTGLDFHSPRIAQLCSRSPSANPMQISSTDNELAIRFKTDSSLNGR 1497

  Fly   946 GFSAVFMKEVDECETQNHGCEHECINTLGGYECSCRIGFELHSDKKHCEDACGGVIEYPNGTITS 1010
            ||:|.:..                  ..||                     |||:.:...|.|.|
Mouse  1498 GFNASWRA
------------------VPGG---------------------CGGIFQVSRGEIHS 1523

  Fly  1011 PSFPEMYPLLKECIWEIVAPPKHRISLNFTHFDLEGTAHQQSDCGYDSVTVYSKLGENRLKRIGT 1075
            |::|..|....||.|.|.....||:.||.|.||||.|         ||..:......:...|:.|
Mouse  1524 PNYPNNYRANTECSWIIQVEKYHRVLLNITDFDLEAT---------DSCLMTYDGSSSANTRVAT 1579

  Fly  1076 FCGSSIPPTA-TSESNALRLEFHSDKSIQRSGFAAVFFTDIDECAVNNGGCQHECRNTIGSYICM 1139
            .||...||.: ||..|:|.:.|.|..|.|..||.|.|              :.||    |::|  
Mouse  1580 VCGRQQPPNSITSSGNSLFV
RFQSGSSSQSRGFRAQF--------------RQEC----GAHI-- 1624

  Fly  1140 CHNGYSMHENGHDCKEGECKYEISAPFGTIFSPNYPDSYPPNADCVWHF-ITTPGHRIKLIFNEF 1203
                                  |:....:|.||.||.:||.|.:|.|.. ...|.:.|.|.|..|
Mouse  1625 ----------------------ITDSSDSISSPLYPANYPNNQNCTWIIEAQPPFNHIALSFTHF 1667

  Fly  1204 DVESHQECTYDNVAVYDGESESSSVLGRFCGDKIPFPISSTSNQMYMVLKTDKNKQKNGFTASHS 1268
            .::|..:||.|.|.:.||....:.|.||:||..:|.||.|..|.:.:...:|.....:||.|.:|
Mouse  1668 HLQSSTDCTRDFVEILDGRDSDAPVQGRYCGTSLPHPIISFGNALTVRFVSDSVYGFDGFHAIYS 1732

  Fly  1269 ---TACGGYLRATSQVQQFYSHARFGN-----QDYDDGMDCEWTIAAPDNSYVQLIFLTFDIESS 1325
               :||||         .||:.....|     :||....:|.|.||:...:::||.||:|.:|:|
Mouse  1733 ASTSACGG---------TFYTGDGIFNSPGYPEDYHSNTECVWNIASSPGNHLQLSFLSFQLENS 1788

  Fly  1326 ENCTFDYVQVFSDIDDVYGQYGPMYGQYCGNVLPQDINSMT-HSLLVRFKTDGSVPMKGFSASYV 1389
            .||..|:|::...     ...|.:.|:||||.||.:.:|:. |:|.|||.:|||....||.|.:.
Mouse  1789 LNCNKDFVEIREG-----NATGHLMGRYCGNSLPGNYSSIEGHNLWVRFVSDGSGTGMGFQARFK 1848

  Fly  1390 AVPNSGEYDHSDEDVENSYSSEMVTPF-PGS--LKSIY 1424
            .:       ..::::..:: .::.||| ||:  |.|.|
Mouse  1849 NI-------FGNDNIVGTH-GKIATPFWPGNYPLNSNY 1878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tokNP_001287510.1 ZnMc_BMP1_TLD 520..721 CDD:239808 4/13 (31%)
Astacin 527..721 CDD:279708 4/13 (31%)
CUB 723..836 CDD:294042 36/129 (28%)
CUB 840..951 CDD:278839 42/113 (37%)
FXa_inhibition 958..993 CDD:291342 2/34 (6%)
CUB 997..1111 CDD:278839 42/114 (37%)
FXa_inhibition 1118..1153 CDD:291342 4/34 (12%)
CUB 1158..1267 CDD:278839 37/109 (34%)
CUB 1271..1390 CDD:238001 43/124 (35%)
CubnNP_001074553.1 Interaction with AMN. /evidence=ECO:0000250|UniProtKB:O60494 39..46
EGF_CA 133..164 CDD:238011
EGF_CA 167..207 CDD:238011
EGF_CA 260..301 CDD:214542
EGF_3 306..344 CDD:289699
EGF_3 350..387 CDD:289699
EGF_CA 400..430 CDD:238011
EGF_CA 432..468 CDD:238011
CUB 474..585 CDD:238001
CUB 590..699 CDD:238001
CUB 708..815 CDD:238001
CUB 817..927 CDD:238001
CUB 932..1041 CDD:238001
CUB 1052..1158 CDD:238001
CUB 1165..1275 CDD:238001 7/24 (29%)
CUB 1278..1388 CDD:238001 33/119 (28%)
CUB 1391..1505 CDD:238001 42/115 (37%)
CUB 1510..1599 CDD:238001 35/97 (36%)
CUB 1620..1733 CDD:238001 40/140 (29%)
CUB 1738..1847 CDD:238001 43/122 (35%)
CUB 1859..1962 CDD:238001 8/21 (38%)
CUB 1978..2089 CDD:238001
CUB 2092..2212 CDD:238001
CUB 2217..2333 CDD:238001
CUB 2336..2447 CDD:238001
CUB 2452..2564 CDD:238001
CUB 2570..2686 CDD:238001
CUB 2689..2800 CDD:238001
CUB 2805..2918 CDD:238001
CUB 2920..3034 CDD:238001
CUB 3037..3148 CDD:238001
CUB 3157..3273 CDD:238001
CUB 3278..3392 CDD:238001
CUB 3395..3506 CDD:238001
CUB 3511..3623 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842308
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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