DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tok and Mep1b

DIOPT Version :9

Sequence 1:NP_001287510.1 Gene:tok / 42944 FlyBaseID:FBgn0004885 Length:1464 Species:Drosophila melanogaster
Sequence 2:NP_037315.1 Gene:Mep1b / 25727 RGDID:3081 Length:704 Species:Rattus norvegicus


Alignment Length:603 Identity:147/603 - (24%)
Similarity:214/603 - (35%) Gaps:164/603 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   529 WDYGVIPYEIDGNFSGIHKALFKLAMRHWENSTCIKFVERDPEIHPNYI-VFTVRSCGCCSFVGK 592
            |.: .|||.::.:.....|.:...|...:...|||.|.....|  .||| ||  :..||.|.||.
  Rat    72 WPH-TIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWSGE--ENYISVF--KGSGCWSSVGN 131

  Fly   593 RGNGPQAISIGRNCDKFGIVVHELGHVVGFWHEHTRPDREKHVVIEHNNIMKGQDYNFNMLSPDE 657
            ...|.|.:|||.|||:...|.||..|.:|||||.:|.||:.::.|..:.|:.|:::|||:.:...
  Rat   132 IHAGKQELSIGTNCDRIATVQHEFLHALGFWHEQSRADRDDYITIVWDRILSGKEHNFNIYNDSV 196

  Fly   658 VDSLGMAYDYDSIMHYARNTFSKGTYLDTILPIEMKGRKRPEIGQRLRLSQGDIAQANLLYKCPK 722
            .|||.:.|||.|:|||::..|..||....|..|   ......||||:..|..|:.:.|.||.|..
  Rat   197 SDSLNVPYDYTSVMHYSKTAFQNGTESTIITKI---SDFEDVIGQRMDFSDYDLLKLNQLYSCTS 258

  Fly   723 ---------------CG--------RTFQESSGIFASP--SHYTAGALSNETEHCEWRITATYGE 762
                           ||        ..:|..|.:.:.|  .|...|...:......:. |:|...
  Rat   259 SLSFMDSCDFELENICGMIQSSQDSADWQRLSQVLSGPENDHSNMGQCKDSGFFMHFN-TSTGNG 322

  Fly   763 RVELKLENMNIF--KSNNCETDYLEIRDG-------YFEKSPLIGRFCG--KVDKEVIRTESSRM 816
            .:...||:..::  :...|...|| ...|       .:.:....|...|  .:.:|:....:...
  Rat   323 GITAMLESRVLYPKRGFQCVEFYL-YNSGSGNGQLNVYTREYTAGHQDGVLTLQREIRDIPTGSW 386

  Fly   817 LLTYVNTHRIEGFRGFKAEFDVVCG-----GELSVDDA-VGRLESPNYPLDYLPNKECVWKI--- 872
            .|.||.....|.||   ..|:.|.|     |.||:||. :.....|::          :|.|   
  Rat   387 QLYYVTLQVTEKFR---VVFEGVGGPGASSGGLSIDDINLSETRCPHH----------IWHIQNF 438

  Fly   873 --------TV--PESY-----------------QVALKFQSFEVENHDS----CVYDYV------ 900
                    ||  |..|                 .|.|.|......|.|.    |.:...      
  Rat   439 TQLLGGQTTVYSPPFYSSKGYAFQINLDLTSPTNVGLYFHLISGANDDQLQWPCPWQQATMTLLD 503

  Fly   901 -------------------EVRDGPGQ---DAP-LIGVFCGYKPPPN------------------ 924
                               ::.|..|.   |.| .:||...:   ||                  
  Rat   504 QNPDIRQRMSNQRSITTDPKMTDDNGSYLWDRPSKVGVEAFF---PNGTQFSRGRGYGTSVFITQ 565

  Fly   925 --MKS----SGNSMYVKFVSDTSVQKAGFSAVFMKEVDECETQNHGC-EHECIN----TL--GGY 976
              :||    .|:.:|: .::...:.....:|.....|....|.::.| |.||.|    ||  |..
  Rat   566 ERLKSREFLKGDDVYI-LLTVEDISHLNSTAAVPGPVPTTSTVHNACSEVECQNGGICTLQEGRA 629

  Fly   977 ECSCRIGFELHSDKKHCE 994
            ||.|..|.:.....|.||
  Rat   630 ECKCPAGEDWWYMGKRCE 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tokNP_001287510.1 ZnMc_BMP1_TLD 520..721 CDD:239808 71/192 (37%)
Astacin 527..721 CDD:279708 71/192 (37%)
CUB 723..836 CDD:294042 24/133 (18%)
CUB 840..951 CDD:278839 32/203 (16%)
FXa_inhibition 958..993 CDD:291342 14/41 (34%)
CUB 997..1111 CDD:278839
FXa_inhibition 1118..1153 CDD:291342
CUB 1158..1267 CDD:278839
CUB 1271..1390 CDD:238001
Mep1bNP_037315.1 ZnMc 30..256 CDD:294052 71/191 (37%)
Astacin 70..258 CDD:279708 72/193 (37%)
MAM 266..430 CDD:279023 32/168 (19%)
MAM 266..428 CDD:99706 32/166 (19%)
MATH 428..586 CDD:295307 25/171 (15%)
EGF_CA 609..647 CDD:238011 13/37 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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