Protein Alignment Rpb10 and RPB10

DIOPT Version :9

• Sequence 1: NP_651280.1
• Gene: Rpb10 / 42942
• FlyBaseID: FBgn0039218
• Length: 67
• Species: Drosophila melanogaster
• Sequence 2: NP_014853.3
• Gene: RPB10 / 854385
• SGDID: S000005736
• Length: 70
• Species: Saccharomyces cerevisiae
• Alignment Length: 68
• Identity: 50/68 - (73%)
• Similarity: 56/68 - (82%)
• Gaps: 1/68 - (1%)

  Fly     1 MIIPIRCFTCGKVIGNKWESYLGLLQA-EYTEGDALDALGLKRYCCRRMLLGHVDLIEKLLNYAP 64
            ||:|:|||:||||:|:||||||.|||. |..||.||..|||||||||||:|.|||||||.|.|.|
Yeast     1 MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLGLKRYCCRRMILTHVDLIEKFLRYNP 65

  Fly    65 LEK 67
            |||
Yeast    66 LEK 68

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb10	NP_651280.1	PLN00032	1..67	CDD:215034	48/66 (73%)
RPB10	NP_014853.3	RNA_pol_N	1..70	CDD:412528	50/68 (74%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157346844
Domainoid	1	1.000	96	1.000	Domainoid score	I1643
eggNOG	1	0.900	-	-		E1_COG1644
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H129854
Inparanoid	1	1.050	108	1.000	Inparanoid score	I1400
Isobase	1	0.950	-	0	Normalized mean entropy	S44
OMA	1	1.010	-	-		QHG62157
OrthoFinder	1	1.000	-	-		FOG0003540
OrthoInspector	1	1.000	-	-		oto99159
orthoMCL	1	0.900	-	-		OOG6_101548
Panther	1	1.100	-	-	LDO	PTHR23431
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1179
SonicParanoid	1	1.000	-	-		X2037
TreeFam	1	0.960	-	-
	16	15.740