DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppox and spr-5

DIOPT Version :9

Sequence 1:NP_651278.2 Gene:Ppox / 42939 FlyBaseID:FBgn0020018 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_493366.1 Gene:spr-5 / 173214 WormBaseID:WBGene00005010 Length:770 Species:Caenorhabditis elegans


Alignment Length:510 Identity:104/510 - (20%)
Similarity:161/510 - (31%) Gaps:169/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLGGGLSGLSAGYYLLRRFGKPLTIYEASPRVGGWVRSENRKDRNFIFESGPRTIRPVGEPGANT 69
            |:|.|.:|:||... |..||..:.:.||...:||.:.|       |..:||     .:.|.|.:|
 Worm   139 VIGAGAAGISAATQ-LESFGFDVIVLEARNCIGGRIHS-------FKSKSG-----EIMETGGDT 190

  Fly    70 LELVEDLKLEVTPIRRSHVAARNRMLYAKGQLCMLPNSPKGLFGVLPPFTKPLYKAVLRDLFTAS 134
            |..:||..:...                   |..:.....|:|    .||         .:|...
 Worm   191 LRKIEDSPMATL-------------------LHQVNFEEHGVF----DFT---------SVFVEG 223

  Fly   135 KKAKLEDESIYSFAERRFGKEIADYAISPMICGICAGDAREISVRFLMEGLFEKEQKYGGVL--- 196
            :  .|.:|.|:.|.:......           |.....|.:...|........::|.|..:|   
 Worm   224 R--PLNEEKIHLFLDHYKSAH-----------GALNYQAHQCEHRDDQGSFISRQQAYENLLSMC 275

  Fly   197 -KGTLISRFEKNKTKDT----------------KDGLFAERQPKLYAQAVKEKWAMYGLKGGLEN 244
             :||||..:...|:.:|                ...|.||.|.|...:           :|.||.
 Worm   276 ERGTLIKYYNFCKSLETVARAREHHFNQMKQLRMTALMAENQLKKMEE-----------EGNLEQ 329

  Fly   245 LPKTMRKYLGERDVNVQLS--NECRNL--TFSSSGVRMNIKDAEVPVEHVVSSLPAYKLAPLVKQ 305
            .| .:|:.| :||:...|.  .|..:.  |..:...|:|        ||           |..||
 Worm   330 DP-VLRRSL-KRDIATSLEKFEEVADAFETADNHWQRLN--------EH-----------PQAKQ 373

  Fly   306 -QHPS----------------LSAQLLSIPYVDVLVVNMQFPGKLLKQDGFGLLVPPVEKLPLLG 353
             .||.                :.|||..:.:....:.|.:........:|...|:..:.:...|.
 Worm   374 YMHPGSEFATFNFMLGFEEYLVGAQLEKVQFSCDSMQNKENGVAARLTEGIAELLTQLSEKRKLD 438

  Fly   354 VIFDSCCFDMG----ENTVLTVMMGGHWFDQWFGDRPSPKQILDLAT--SHVQKMLQIREEPKFS 412
            :.......|:.    |:.:|.|....       ||....|....::|  ..|.|...|.:|    
 Worm   439 IRLKHRVLDIDYSGFEHVLLKVQREN-------GDIEEMKAAFVVSTLPIGVLKKTIIADE---- 492

  Fly   413 RVHTLHKCIPQYTVGHKRRVEAIRNYIKTYKLPLSVCGAAYDGVGINDVILSARR 467
            |..|....:|.      ::||||||.         .||:      :|..||...|
 Worm   493 RAPTFTPSLPD------KKVEAIRNI---------GCGS------VNKCILEFDR 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpoxNP_651278.2 HemY 17..472 CDD:224153 98/498 (20%)
NAD_binding_8 18..76 CDD:290186 16/57 (28%)
spr-5NP_493366.1 SWIRM 36..117 CDD:282311
Amino_oxidase 151..676 CDD:279874 98/498 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161006
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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