DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and UBP15

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_014033.1 Gene:UBP15 / 855350 SGDID:S000004920 Length:1230 Species:Saccharomyces cerevisiae


Alignment Length:1071 Identity:218/1071 - (20%)
Similarity:371/1071 - (34%) Gaps:327/1071 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  2000 WDYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPNAARKHGPTLLELQRM 2064
            |..:...:.:...||||..|.|||||:.|.:|..:.....|..|..:|......:....|.|||.
Yeast   190 WHNFLNYDSKKVTGYVGFRNQGATCYLNSLLQSYFFTKYFRKLVYEIPTEHESPNNSVPLALQRA 254

  Fly  2065 FAYLLESERKSYNPRSFCRVYQMDHQPLNTGE--------------QKDMAEFFIDLVSKLEDM- 2114
            |..|                 |:...||:|.|              |.|:.|....|:.:||:. 
Yeast   255 FYQL-----------------QVSDIPLDTLELTRSFGWDTAESFTQHDVQELNRILMDRLENNM 302

  Fly  2115 --TPDLKHLVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMRNLQESLDEVTVKDTLEG 2177
              || ::..:..:|.|.:.:.:..::..:.|...|||:.::..|.:.:|||||.|.....:.:.|
Yeast   303 KGTP-VEGKLNEIFVGKMKSYIKCINVDYESARVEDFWDLQLNVKNFKNLQESFDNYIEMELMNG 366

  Fly  2178 DNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMR--YTFNMVTMLKEKVNTHFSFPLRLNMCHYV 2240
            :|.|.....|.: .|:|...|:..|.:|.....|  |.||...|:  |||..:.||..:::..:|
Yeast   367 ENQYAAQDYGLQ-DAQKGVIFESFPPVLHLQLKRFEYDFNYDQMV--KVNDKYEFPETIDLSPFV 428

  Fly  2241 EKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGH 2305
            :|.::    |:..:...|:|..                        |.|.|.||.||:|....||
Yeast   429 DKDVL----KKTLDSENKDKNP------------------------YVYNLHGVLVHSGDISTGH 465

  Fly  2306 YYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEM--TSKTYDSVTEKYLDFSFEK 2368
            ||:.||...:      ::|:.|:|..|......|:..|.||.:.  ..|.......:|.::..::
Yeast   466 YYTLIKPGVE------DQWYRFDDERVWRVTKKQVFQENFGCDRLPDEKVRTMTRGEYQNYIIQR 524

  Fly  2369 TNSAYMLFYERR--------------LPEH-LQRRHSELLVTPTPSPTVEE-------------- 2404
            ..|||||.|.|:              :|:| :.|...|:....|....:.|              
Yeast   525 HTSAYMLVYIRQEQEEDLLRPVLESDVPKHVITRVREEIKERETKEKEIREAHLYVTLRLHSIKE 589

  Fly  2405 ---------------KSEAEE---------------PTKMETSSSEIKADVDVEVEVEEKDKEKP 2439
                           :..|||               .||:....:.||..:::..|.:.|..:..
Yeast   590 FIHYEGFDYFAHDGFRLFAEELNDSGLQQINLKVLRTTKLSDIFASIKETMNIPQERDVKYWKMD 654

  Fly  2440 AQTDTESKET-PAKEEIADDKSKQDEPEEKKIEKQSREGEE---KSETDEKPTEMTTVS-----T 2495
            .:.::..:.| |...|..:...::...:|||...|::.|||   .:|.|:|.. :.|||     .
Yeast   655 YRRNSTLRLTQPINFESVNITLQEALKKEKKRTMQTQYGEEGVASTEEDDKAL-LETVSFLDLFI 718

  Fly  2496 EE--------EKQPTANCDNHQQ---------------------------NNNSNSKASNDQQPS 2525
            ||        .|...|:..:..|                           :|.||........|.
Yeast   719 EEPYLELQFLNKLKEASLISKAQLDDELISTIRTNLPELTKGGIEPVFATDNKSNLLFVKSYDPH 783

  Fly  2526 TSK-------AAQKLQLFRPLLNKELEDWIWQDN------------------RQFLQDRNI---- 2561
            |.|       |..:||.... ::..:||.|..:.                  ::.:.|.:|    
Yeast   784 TQKLLGFGHFAVNQLQQLSD-ISAIIEDSISSNEKLTFYEEVQPGTINEIYMKETIYDADIDTGD 847

  Fly  2562 ---FE-------------------HTYFNFM--------------WQICGHIPQSLISETDVTCM 2590
               ||                   ::|..:.              :.:...||:|.  |..::..
Yeast   848 IVSFEVPGAVLPDTFPVYATIKDFYSYLRYRVKLKFSKFDGSSEEYGVSNEIPESF--EFWISAY 910

  Fly  2591 AAKLSVSFFIETFIHAKEKPTMVPWVEL-----------------LTKQFNASQ------EACEW 2632
            |....::..:..:.|.  ||..:..:.|                 |.|.||..|      |....
Yeast   911 APYDDLARMVSKYAHV--KPEYLKIIALYSNGRFVLKSTSLLNDYLLKDFNCDQIPPFAFEVLSV 973

  Fly  2633 FLSHMSQ----EPYWPVQVLI--QC-----PNQMVRQMFQRLVIHVIQQLRASHAHLYLEVETDE 2686
            .|..:.:    :.||.....|  ||     .|......|...|.|.|.             .|||
Yeast   974 PLKELERLRPIKLYWLKNSYIHYQCFEFEVANDYTESQFLEKVQHKIG-------------FTDE 1025

  Fly  2687 DDKELIGQASCVTRFIGSLISLLEHGARANLRHLSEYFGLLCEFSRMGDEEAMYLLRIGVLKSLV 2751
            :.:.::...:...:|.|.|      ..:...:.:|:: .||  |.|:..||:.....:..|::: 
Yeast  1026 EKENILLWTNTNFQFQGLL------SDQNTFKDVSKH-SLL--FGRILPEESKLFKELNRLENV- 1080

  Fly  2752 DFYLGHKQTDSIDISSDNEDNSSEEALSVEKMRPASLDKMIALCASLVERSRGADFRLRLSPKDF 2816
                   ||.|::...|:| |:::        ||...::.:.:.   :|.|.....|:.:..:.|
Yeast  1081 -------QTSSLEDFMDDE-NATD--------RPMDDEQDLGMA---IEHSEDMKGRIVVVQQYF 1126

  Fly  2817 SAIAGGKGFPFLYQQIKDGINPHQTKHLIHA 2847
            ..:....|..||:..|.|...| :||..:||
Yeast  1127 KDLENRHGISFLFNLIPDETFP-KTKDRLHA 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 102/403 (25%)
UCH 2014..2377 CDD:278850 99/383 (26%)
DUF3517 2723..>2877 CDD:288853 29/125 (23%)
UBP15NP_014033.1 COG5077 1..1229 CDD:227409 218/1071 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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