DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and UBP8

DIOPT Version :10

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_013950.1 Gene:UBP8 / 855263 SGDID:S000004836 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:460 Identity:105/460 - (22%)
Similarity:166/460 - (36%) Gaps:141/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1972 CRGCATNYAYLHGRLLAQHKSGPKQPYPWD------YWPRDEGRAECGYVGLTNLGATCYMASCV 2030
            |.....|...::..:||::         ||      ..|..|.|.  |..||.|:|:||:|:|.:
Yeast    99 CEDYIGNIDLINDAILAKY---------WDDVCTKTMVPSMERRD--GLSGLINMGSTCFMSSIL 152

  Fly  2031 QHLYMMPQ-ARAAVLRVPPNAARKHGP----------------------------TLLELQRMFA 2066
            |.|...|. .|.::.::..|..:...|                            |....|..|.
Yeast   153 QCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFI 217

  Fly  2067 YLLESERKSYNPRSFCRVYQMDHQPLNTGEQKDMAEFFIDLVSKLEDM----TPDLKH------- 2120
            |||....|.             :|.|....|:|..||:..:::::...    .|:.|.       
Yeast   218 YLLTCAWKI-------------NQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNK 269

  Fly  2121 ----LVKRLFCGSLSNNVVSLDCGHVSRTAED-FYTVRCQVADMRNLQESLDEVTVKDTLEGDNM 2180
                :|..:|.|||.:::|...|.:.|:|..| |..:...:.|.:.|.|.||....|:.|:..| 
Yeast   270 QCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFN- 333

  Fly  2181 YTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLM 2245
            |.|.:|.....|.|:....|||.:|.....|:. :::.....|::....||..|||.:|.     
Yeast   334 YHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFE-HLLNGSNRKLDDFIEFPTYLNMKNYC----- 392

  Fly  2246 PQQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGHYYSFI 2310
                    ..::|:|...:|.            :.|.|     |||:|:..|.||.:.|||.:|.
Yeast   393 --------STKEKDKHSENGK------------VPDII-----YELIGIVSHKGTVNEGHYIAFC 432

  Fly  2311 KERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYML 2375
            |       .:..:||.|||:.|......::..|                           .||:|
Yeast   433 K-------ISGGQWFKFNDSMVSSISQEEVLKE---------------------------QAYLL 463

  Fly  2376 FYERR 2380
            ||..|
Yeast   464 FYTIR 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 96/413 (23%)
DUF3517 2648..>2884 CDD:463438
MDN1 <3661..>3887 CDD:444083
UBP8NP_013950.1 zf-UBP 46..108 CDD:460464 2/8 (25%)
Peptidase_C19D 138..466 CDD:239125 93/406 (23%)
Blue background indicates that the domain is not in the aligned region.

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