DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and UBP2

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_014767.3 Gene:UBP2 / 854291 SGDID:S000005650 Length:1272 Species:Saccharomyces cerevisiae


Alignment Length:1376 Identity:247/1376 - (17%)
Similarity:418/1376 - (30%) Gaps:537/1376 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1334 DNQIVYVSLGGRGARRKESNLEHPSMLPPPPKECLPTV---LLLQ----------PKYFEKLFCL 1385
            |.:::...|..||. .|||.|.:.:........||.::   ::.|          ||| .|:...
Yeast    91 DPKVMQKGLQSRGI-LKESMLSYSTFRSSIRPNCLGSLTDQVVFQTKSEYDSISCPKY-NKIHVF 153

  Fly  1386 MQTLGD---MQPQASTVN-----PQHHTKAQLLSR-------------------------RVWDI 1417
            ...:.:   .:.|.||.:     |.:|.|..:..|                         || |:
Yeast   154 QAVIFNPSLAEQQISTFDDIVKIPIYHLKVSVKVRQELERLKKHVGVTQFHSLDHLHEYDRV-DL 217

  Fly  1418 LAMLPTNPHILDAFKSLVTD------LSELEQLDAGGEEEQLATKRKQIKQKF------RDLLD- 1469
            .....::|::|| :...|:|      |.|:.:.:....||..:.....||:::      .:.|| 
Yeast   218 STFDSSDPNLLD-YGIYVSDDTNKLILIEIFKPEFNSPEEHESFTADAIKKRYNAMCVKNESLDK 281

  Fly  1470 ---PNNLQKFMYSLHIVESLALTSSRRGE-----SNGNVAMGNT---PEQVRVK-----KSSMGR 1518
               |:.:..| |:|..:....||...:.|     .:||:|: ||   ||.:..|     .|.:..
Yeast   282 SETPSQVDCF-YTLFKIFKGPLTRKSKAEPTKTIDSGNLAL-NTHLNPEWLTSKYGFQASSEIDE 344

  Fly  1519 RRNS--NEQPPP---------PPPEVKMSKEQLC-----------ELEAPLTPTPST----GLQD 1557
            ..|.  .|..||         ...:::.|..:.|           .|.||.:|..:|    |:..
Yeast   345 ETNEIFTEYVPPDMVDYVNDLETRKIRESFVRKCLQLIFWGQLSTSLLAPNSPLKNTKSVKGMSS 409

  Fly  1558 VETEASSSSGGDKENQPKQHSKRQKKGETFEQEKERPVGCSTPPSPTPPPPALSVVERGDNKWSE 1622
            ::|..|:        .|..|...:.:........|:   ..:|....|....|||          
Yeast   410 LQTSFST--------LPWFHLLGESRARILLNSNEQ---THSPLDAEPHFINLSV---------- 453

  Fly  1623 AFVKCGGLRHLY---EIFSEGQLQQSAHPKELALNEWRHDCLASLLR-------ILW-----LLG 1672
                    .|.|   :|....:...|..|:.:.|   ..|.|..:..       |.:     ::|
Yeast   454 --------SHYYTDRDIIRNYESLSSLDPENIGL---YFDALTYIANRKGAYQLIAYCGKQDIIG 507

  Fly  1673 FEELQSADAHVLMSRPHPFMLQLMEVPQCLTRLSSILNDEVHQQHQASSANPLVFPYQFQHLRTG 1737
            .|.|::|   :||.:.:|....:.|:.:  ..|.||...|...:.|.:|          .||   
Yeast   508 QEALENA---LLMFKINPKECNISELNE--ATLLSIYKYETSNKSQVTS----------NHL--- 554

  Fly  1738 FWGRAQLIQFAMNILVSFVHASAEARRLLWAPTGTDHCRWLQKFILEDPEP-------------- 1788
                       .|:        ..|.|||...|.:|..    ||.: |.||              
Yeast   555 -----------TNL--------KNALRLLAKYTKSDKL----KFYV-DHEPYRALSQAYDTLSID 595

  Fly  1789 -AVRREICAGLYRICLGNAHSYRLLLAPLLHKLIALLPLAEQMSSGNQHTQFLLSE--EGKDPYG 1850
             :|..:|....|.:.:.::...:|.....|: .||:...:..:.:      ||..|  :..:.||
Yeast   596 ESVDEDIIKTAYSVKINDSPGLKLDCDRALY-TIAISKRSLDLFN------FLTEECPQFSNYYG 653

  Fly  1851 PACRDYFWLLARLVDTLSPEMVAEEHIDIEMLCESISQSILTREYYELRHGYQDDGLVGLLNLMS 1915
            |...||                 :|.:.:..:.|:.|...:.:.:   :..:.|:.:        
Yeast   654 PEKLDY-----------------QEALKLLQVNENASDETILKIF---KQKWFDENV-------- 690

  Fly  1916 NLIKYDTTFKYTPKALSFIEQLIGFLFDMPSPADRQKPKCKSASSRASAYDLLVELCRGCATNYA 1980
                      |.|.....:                          ||:...:.:|......||: 
Yeast   691 ----------YEPDQFLIL--------------------------RAALTKISIERNSTLITNF- 718

  Fly  1981 YLHGRLLAQHKSGPKQP--YPWDYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAV 2043
                 ||    :|...|  .|.:.||          .|:.|:|.|||:.|.:|:.:.:...|..|
Yeast   719 -----LL----TGTIDPNSLPPENWP----------TGINNIGNTCYLNSLLQYYFSIAPLRRYV 764

  Fly  2044 LRVPPNA------------ARKHG-------------PTLLELQRMF-----------------A 2066
            |......            .|:.|             ..:.:|:.:|                 |
Yeast   765 LEYQKTVENFNDHLSNSGHIRRIGGREISRGEVERSIQFIYQLRNLFYAMVHTRERCVTPSKELA 829

  Fly  2067 YL------------------------LESERKSYNPRSF-------------------------- 2081
            ||                        |...:|.....:|                          
Yeast   830 YLAFAPSNVEVEFEVEGNKVVDQTGVLSDSKKETTDDAFTTKIKDTSLIDLEMEDGLNGDVGTDA 894

  Fly  2082 ------------------------CRVYQMD----HQPLNTGEQKDMAEFFIDLVSKLEDMTPDL 2118
                                    .||.::.    ...|..|.|:|:.|...:::.::|..:..:
Yeast   895 NRKKNESNDAEVSENEDTTGLTSPTRVAKISSDQLENALEMGRQQDVTECIGNVLFQIESGSEPI 959

  Fly  2119 KH--------LVKRLFCGSLSNNVVSLDCGHVSRT-AEDFYTVRCQVADMRNLQESLDEVTVKDT 2174
            ::        |||:||.|:...::|.|...:..|| .|.|.::...:.|     ...|.....|:
Yeast   960 RYDEDNEQYDLVKQLFYGTTKQSIVPLSATNKVRTKVERFLSLLINIGD-----HPKDIYDAFDS 1019

  Fly  2175 LEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHY 2239
            ...|...|..:.|..:|......|   |.||.....|..::...::..|......|...:.|..|
Yeast  1020 YFKDEYLTMEEYGDVIRTVAVTTF---PTILQVQIQRVYYDRERLMPFKSIEPLPFKEVIYMDRY 1081

  Fly  2240 --VEKTLMPQQYKEERE---------RRQKEKEGADGSG-------------------------- 2267
              .|..|:..:.||..|         .||:|....|.||                          
Yeast  1082 ADTENPLLLAKKKETEEMKQKLKVMKNRQRELLSRDDSGLTRKDAFLESIKLLESDTIKKTPLKI 1146

  Fly  2268 --------------DGNDNEKAEATLD------------DDIEECYEYELVGVTVHTGTADGGHY 2306
                          ...|||..:...|            ||.:| |.|.|..|.:|.|.|..|||
Yeast  1147 EAANDVIKTLRNNVQNIDNELMKLYNDINSLEEKISHQFDDFKE-YGYSLFSVFIHRGEASYGHY 1210

  Fly  2307 YSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSFEKTNS 2371
            :.:||:|.:...     |..:||                      :|...|.|:.: |:|.:.|:
Yeast  1211 WIYIKDRNRNGI-----WRKYND----------------------ETISEVQEEEV-FNFNEGNT 1247

  Fly  2372 A--YMLFYERR 2380
            |  |.|.|.::
Yeast  1248 ATPYFLVYVKQ 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 101/562 (18%)
UCH 2014..2377 CDD:278850 100/556 (18%)
DUF3517 2723..>2877 CDD:288853
UBP2NP_014767.3 RPT 585..641 CDD:404348 7/62 (11%)
RPT 658..719 CDD:404348 13/130 (10%)
Peptidase_C19J 735..1256 CDD:239131 101/567 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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