DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and USP38

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_115946.2 Gene:USP38 / 84640 HGNCID:20067 Length:1042 Species:Homo sapiens


Alignment Length:985 Identity:197/985 - (20%)
Similarity:320/985 - (32%) Gaps:360/985 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1637 FSEGQLQQSAHP---KELALNEWRHDCL------ASLLRILWLLGFEELQSADAHVLMSRPHPFM 1692
            |..|.|.|..|.   |::|:.::.|:.|      .|:|.:..||..|.|:     ::..||.   
Human    84 FVLGLLHQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLR-----MVCERPE--- 140

  Fly  1693 LQLMEVPQCLTRLSSILNDEVHQQHQASSANPLVFPYQFQHLRTGFWGRAQLIQFAMNILVSFVH 1757
                  ||...|||.:|.|.|    |......|...:..|.:||  .|..|.:......|..:|.
Human   141 ------PQLCARLSDLLTDFV----QCIPKGKLSITFCQQLVRT--IGHFQCVSTQERELREYVS 193

  Fly  1758 ASAEARRLL---WAPTGTDHCRWLQKFILEDPEPAVRREICAGLYRICLGNAHSYRLLLAPLLHK 1819
            ...:...||   |                 ..|||........::........|:...:|  |..
Human   194 QVTKVSNLLQNIW-----------------KAEPATLLPSLQEVFASISSTDASFEPSVA--LAS 239

  Fly  1820 LIALLPLAEQMSSGNQHTQFLLSEEGKDP-------YGPACRDYFWL---LARLVDT----LSPE 1870
            |:..:||        |....|:.....||       ....||...||   ||:.|||    |...
Human   240 LVQHIPL--------QMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKG 296

  Fly  1871 MVAEEH----IDIEML------------------CESISQSILTREY------------YELRHG 1901
            :.|.:.    ||:.:|                  ...:|..:|:.::            ..|.|.
Human   297 LAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVHS 361

  Fly  1902 YQDDG-------LVGLLNLMSNLIKYDTTFKYTPKALSFIEQLIGFLFDMPSPADRQKPKCKSAS 1959
            :::||       ||.|..|:..::.:.:.|.      ...|.::..:.|.|.|::.:.....:.|
Human   362 FKNDGLPSSTAFLVQLTELIHCMMYHYSGFP------DLYEPILEAIKDFPKPSEEKIKLILNQS 420

  Fly  1960 SRASAYDLLVELCRGCATNYAYLHGRLLAQHKSGPKQPYPWDYWPRDEGRAECGYVGLTNLGATC 2024
            :..|..:.|.    .|.:                           |..|::|.|..||.|||.||
Human   421 AWTSQSNSLA----SCLS---------------------------RLSGKSETGKTGLINLGNTC 454

  Fly  2025 YMASCVQHLYMMPQARAAVLRVPPNAARKHGPTLLELQRMFAYLLESERKSYNPRSFCRVYQMDH 2089
            ||.|.:|.|:|....|..||.:..|....   .:.:||.:||:|..::|::|.||.|   ::...
Human   455 YMNSVIQALFMATDFRRQVLSLNLNGCNS---LMKKLQHLFAFLAHTQREAYAPRIF---FEASR 513

  Fly  2090 QPLNT-GEQKDMAEFFIDLVSKLED-----------------------------------MTPDL 2118
            .|..| ..|:|.:|:...|:.:|.:                                   .||..
Human   514 PPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAAVLTETPRT 578

  Fly  2119 ----KHLVKRLFCGSLSNNVVSLDCGHVSRTAEDFYTVR---CQVADMRNLQ------------- 2163
                |.|::::|.|.|..::..|:|...|:..|.|..:.   |..:.:.|:.             
Human   579 SDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMSVQDPASSPSIQDG 643

  Fly  2164 --------------------------ESL-DEVTV-------------------------KDT-- 2174
                                      :|| :|.|:                         ||.  
Human   644 GLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVPQ 708

  Fly  2175 ----------------------LEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMV 2217
                                  |.|||.|.|..|.....|||.....:.|:.|....:|::::..
Human   709 KPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQK 773

  Fly  2218 TMLKEKVNTHFSFPLRLNMCHYVEKTLMP----QQYKEERERRQKEKEGADGSGDGNDNEKAEAT 2278
            ..::.|:..:.|.||.|.         :|    ..:....|....:.:..|.|.:.....|...|
Human   774 YHVRRKILDNVSLPLVLE---------LPVKRITSFSSLSESWSVDVDFTDLSENLAKKLKPSGT 829

  Fly  2279 LDDDIEECYEYELVGVTVHTG-TADGGHYYSFIKERTKTS-----YHTHE--------------- 2322
            .:....:...|.|..|.||:| :::.|||||:.:..|.|.     ||..|               
Human   830 DEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITSTDSSYQMYHQSEALALASSQSHLLGRD 894

  Fly  2323 -----------------RWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSFEKTN 2370
                             .||||||:.|                 |..::.||.:  :...|.| :
Human   895 SPSAVFEQDLENKEMSKEWFLFNDSRV-----------------TFTSFQSVQK--ITSRFPK-D 939

  Fly  2371 SAYMLFYERR 2380
            :||:|.|:::
Human   940 TAYVLLYKKQ 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 111/542 (20%)
UCH 2014..2377 CDD:278850 109/536 (20%)
DUF3517 2723..>2877 CDD:288853
USP38NP_115946.2 Peptidase_C19H 446..947 CDD:239129 109/535 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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