DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment puf and UBP12

DIOPT Version :10

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_568171.1 Gene:UBP12 / 830548 AraportID:AT5G06600 Length:1116 Species:Arabidopsis thaliana


Alignment Length:724 Identity:171/724 - (23%)
Similarity:269/724 - (37%) Gaps:187/724 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  2001 DYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMPQARAAVLRVPPNAARKHGPTL---LELQ 2062
            |||..| .:.|.|:|||.|.||||||.|.:|.||.:|..|.||..:|  ......||.   |.||
plant   186 DYWSYD-SKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMP--TTENDAPTASIPLALQ 247

  Fly  2063 RMFAYLLESERKSYNPRSFCRVYQMDHQPLNTGEQKDMAEFFIDLVSKLEDMTPD--LKHLVKRL 2125
            .:| |.|:....|...:...:.:..|  ..::..|.|:.|....|..||||....  ::..:::|
plant   248 SLF-YKLQYNDTSVATKELTKSFGWD--TYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQL 309

  Fly  2126 FCGSLSNNVVSLDCGHVSRTAEDFYTVRCQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKV 2190
            |.|...|.:..::....|...|.||.::..|...:::..|.|:....:.|||||.|.....|.: 
plant   310 FEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQ- 373

  Fly  2191 RAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERER 2255
            .|:|...|...|.:|.....|:.::.:.....|:|..:.|||.|::               :|| 
plant   374 DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL---------------DRE- 422

  Fly  2256 RQKEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTGTADGGHYYSFIKERTKTSYHT 2320
                    ||.....|.:::...|         |.|..|.||:|...|||||:||:....     
plant   423 --------DGKYLSPDADRSVRNL---------YTLHSVLVHSGGVHGGHYYAFIRPTLS----- 465

  Fly  2321 HERWFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYMLFY-------- 2377
             ::|:.|:|..|...|..:...|.:|||......:........|.|.|.::||||.|        
plant   466 -DQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDK 529

  Fly  2378 ------ERRLPEHLQRRHSELLVTPTPSPTVEEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDK 2436
                  |:.:.|||:               |..|.|.||  |.:....:.:|.:...::|..   
plant   530 IICNVDEKDIAEHLR---------------VRLKKEQEE--KEDKRRYKAQAHLYTIIKVAR--- 574

  Fly  2437 EKPAQTDTESKETPAKEEIADDKSKQDEPEEKKIEKQSREGEEKSETDEK---PTEM-------- 2490
                  |.:.||...| :|..|....|:....:|:||:...:.|.|..::   |.::        
plant   575 ------DEDLKEQIGK-DIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAK 632

  Fly  2491 ---------TTVSTEEEKQPTANCDNHQQNNNSNSKASNDQQ--------------PSTSKAAQK 2532
                     ..::.:||.||..      |...:::||:..:.              |...|:.:.
plant   633 RQNHTYRPNRPLTPQEELQPVG------QIREASNKANTAELKLFLEVEHLDLRPIPPPEKSKED 691

  Fly  2533 LQLFRPLLNKE------------------------LEDWIWQDNRQFLQDRNI--FEHTYFNFMW 2571
            :.||..|.:.|                        |.:.:     .|..|..|  ||...|. ..
plant   692 ILLFFKLYDPEKAVLSYAGRLMVKSSSKPMDITGKLNEMV-----GFAPDEEIELFEEIKFE-PC 750

  Fly  2572 QICGHIPQSL------ISETDVTCMAAKL----------SVSFFIE-------TFIHAKEKPTMV 2613
            .:|.|:.:..      |.:.|:.|....|          :|..|:|       ....|.|||...
plant   751 VMCEHLDKKTSFRLCQIEDGDIICFQKPLVNKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKED 815

  Fly  2614 PWVELLTKQ 2622
            .:|..|:||
plant   816 EFVLELSKQ 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 105/387 (27%)
DUF3517 2648..>2884 CDD:463438
MDN1 <3661..>3887 CDD:444083
UBP12NP_568171.1 Peptidase_C19 57..1114 CDD:470612 171/724 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.