DRSC/TRiP Functional Genomics Resources

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Protein Alignment puf and USP35

DIOPT Version :9

Sequence 1:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster
Sequence 2:NP_065849.1 Gene:USP35 / 57558 HGNCID:20061 Length:1018 Species:Homo sapiens


Alignment Length:1140 Identity:212/1140 - (18%)
Similarity:348/1140 - (30%) Gaps:459/1140 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1625 VKCGGLRHLYEIFSEGQLQQSAHPKELALNEWRHDCLASLLRI---LWLLGFEELQSADAHVLMS 1686
            ||.|.:|.:        |:.:..|.|      |..||| ||.:   |::.|.|||          
Human    17 VKQGLVRRV--------LEAARQPLE------REQCLA-LLALGARLYVGGAEEL---------- 56

  Fly  1687 RPHPFMLQLMEVPQCLTRLSSILNDEVHQQHQASSANPLVFPYQFQHLR--------TGFWGRAQ 1743
             |.....||:                    |.|...:|.||...|...|        .|..|...
Human    57 -PRRVGCQLL--------------------HVAGRHHPDVFAEFFSARRVLRLLQGGAGPPGPRA 100

  Fly  1744 L--IQFAMNILVS-------FVHASAEARRLLWAPTGTDHCRWLQKFILED----PEPAVRREIC 1795
            |  :|..:.:|..       |.....|..|.:....|...|..:.:.:...    |:...|...|
Human   101 LACVQLGLQLLPEGPAADEVFALLRREVLRTVCERPGPAACAQVARLLARHPRCVPDGPHRLLFC 165

  Fly  1796 AGLYRICLG-----------------NAHSYRLLLA-----------PLLHKLIALLPLAEQ--- 1829
            ..|.| |||                 .|.....|||           |.|.:|.|::..||:   
Human   166 QQLVR-CLGRFRCPAEGEEGAVEFLEQAQQVSGLLAQLWRAQPAAILPCLKELFAVISCAEEEPP 229

  Fly  1830 ---MSSGNQHTQFLLSE------EGKDPYGPACRDYFWLLARLVDTLSPEM-------------- 1871
               ::|..||....|.:      ...|....:  .....::|::|.:|..:              
Human   230 SSALASVVQHLPLELMDGVVRNLSNDDSVTDS--QMLTAISRMIDWVSWPLGKNIDKWIIALLKG 292

  Fly  1872 ---VAEEHIDIEMLCESISQ---------------SILTREYYELRHGYQDDGLV--GLLNLMSN 1916
               |.:..|.||:....|.:               |:|.......:|.::...|:  .:..::::
Human   293 LAAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVAS 357

  Fly  1917 LIKYDTTFKYTPKALSFIEQLIG----FLFDMPSPADRQKPKCKSASSRASAYDLLVELCRGCAT 1977
            |:|.|:.     ...|.:|||..    .:|..|...|..:|..::...                 
Human   358 LVKEDSN-----SGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKD----------------- 400

  Fly  1978 NYAYLH-------GRLLAQHKSGPKQPYPWDYWPRDEGRAECGYVGLTNLGATCYMASCVQHLYM 2035
                ||       .:||.|.....::.....::||...:::.|.:||.|||.|||:.|.:|.|:|
Human   401 ----LHVPNEDRIKQLLGQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFM 461

  Fly  2036 MPQARAAVLRVPPNAARKHGPTLLELQRMFAYLLESERKSYNPRSFCRVYQMDHQP-LNTGEQKD 2099
            ....|..|||:..|.::   |.:.:||.:|.:|..|:|.:.:|.:|   ......| .:.|.|:|
Human   462 ASDFRHCVLRLTENNSQ---PLMTKLQWLFGFLEHSQRPAISPENF---LSASWTPWFSPGTQQD 520

  Fly  2100 MAEFFIDLVSKLED-------MTPDLKH----------------LVKRLFCGSLSNNVVSLDCGH 2141
            .:|:...|:.:|.:       :...||.                .|:::|.|.:...:..|.|.:
Human   521 CSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLN 585

  Fly  2142 VSRTAEDFYTV--------RCQVADMRNLQESLDEVTVK-------------------------- 2172
            ||...|.|..:        ||:...:.::....:::|.:                          
Human   586 VSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITE 650

  Fly  2173 DT------LEG------------------------------------------------------ 2177
            ||      :||                                                      
Human   651 DTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEE 715

  Fly  2178 -------------------------------------------------------------DNMY 2181
                                                                         :|.|
Human   716 EEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRY 780

  Fly  2182 TCSQCGKKVRAEKRACFKKLPQILCFNTMRYTFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMP 2246
            .|..|.....|||.....:.|..|....:|::|::.||.:.|:....|.||.|.         :|
Human   781 YCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLR---------LP 836

  Fly  2247 QQYKEERERRQKEKEGADGSGDGNDNEKAEATLDDDIEECYEYELVGVTVHTG-TADGGHYYSFI 2310
            .               |.|.|..                   |:|..|.||:| :::.||||.:.
Human   837 L---------------AGGRGQA-------------------YDLCSVVVHSGVSSESGHYYCYA 867

  Fly  2311 KE---RTKTSYHTHER------WFLFNDAEVKPFDPSQIAAECFGGEMTSKTYDSVTEKYLDFSF 2366
            :|   |...|..|.:|      |:||||..|                 :..:::||:..   .||
Human   868 REGAARPAASLGTADRPEPENQWYLFNDTRV-----------------SFSSFESVSNV---TSF 912

  Fly  2367 EKTNSAYMLFYERRLPEHLQRRHSELLVTPTPSPTVEEKSE--AEEPTKMETSSSEIKADVDVEV 2429
            ...::||:|||.:|               |...|..|..|.  ..|||..:.....|..|..:.:
Human   913 FPKDTAYVLFYRQR---------------PREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYL 962

  Fly  2430 EVEEKDKEKPAQTDTESKETPAKEEIADDKSKQDE 2464
            :.:||:....|...:....:|......|:...:||
Human   963 QEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDE 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 105/557 (19%)
UCH 2014..2377 CDD:278850 101/551 (18%)
DUF3517 2723..>2877 CDD:288853
USP35NP_065849.1 UCH 441..923 CDD:278850 101/550 (18%)
Peptidase_C19 442..924 CDD:271592 102/550 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..566 2/21 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..757 5/146 (3%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 984..1011 3/14 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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